Empedobacter brevis: F0358_08965
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Entry
F0358_08965 CDS
T06196
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_08965 (sbcD)
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0358_08965 (sbcD)
Archaeal homologous recombinant proteins
F0358_08965 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
YqgU
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
QES92838
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Position
1914962..1916167
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AA seq
401 aa
AA seq
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MRILHTADWHLGKKLDSFSRLEEQILVMNEIVEIANEQQVDLVLIAGDLFDNFNPSVEAV
ELFYKTLKRLSDNGKRPVIAISGNHDSPSLIDAPDPLARECGIILIGYPNAKVQEFEVTG
FQLIKSVEGMIELKLNSFDFPIRILHTAYANEARLKQYLGEKKEDALNEILAVNWKNNAD
EYCDESGVNLLMAHLYMNKKGEEILEEPEGEKPIKIGNADLVFSEAIPSQIQYTALGHLH
GFRNIGTEEKPVVYSSSPLCYSFSEAGQTKYVSIVDAQPDQTVAYNKIELKNGKPLIRKT
FDSVDKALEWLNDNQNALVELTLESESFLKAEDRKLIYQAHSGIVHLIPKVKNQEIEAVE
YKFADQTKDMKELFVDYFKSKNGNQEPNEELKELFNEILNN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctacatacagccgattggcatttgggtaaaaaattggatagtttttcacgt
ttagaagaacaaattttagtgatgaatgaaattgtcgaaatagcgaacgagcaacaagta
gatctggtacttattgcaggtgatttgtttgataatttcaacccaagtgtagaagctgta
gaattgttttataaaacattgaaacgactttccgacaatggaaaacgtccggttatagcg
atttcaggaaatcatgattctccaagtctaattgacgcaccggatcctttggcgcgcgaa
tgcggaattattttgattggatacccaaatgcaaaagttcaggaatttgaagtgacaggt
tttcaattgataaagtcagttgaaggaatgattgaactgaaattgaattcatttgatttt
ccgattcgaattttacatacagcctatgcaaatgaagcccgcttgaaacagtatttaggc
gaaaaaaaagaagatgctttgaatgaaatactggcagtgaattggaaaaataatgcagat
gaatattgtgatgaatccggtgttaacctattgatggctcatttgtatatgaacaaaaaa
ggagaagaaattttagaagaacctgaaggagaaaaaccaattaaaataggaaatgctgat
ctggttttttctgaagcgattccatctcaaattcaatatactgctttaggacatcttcat
ggttttagaaatattggaactgaggaaaaacctgttgtttacagctcttcccctttgtgt
tatagtttttcggaagcgggacaaaccaaatatgtttcgattgtagatgcacaaccagat
caaacggtagcttacaataaaatcgaattgaaaaacggaaaaccattaattcgtaaaacg
ttcgattcggtagataaagctcttgaatggttaaatgacaaccaaaatgcgttggttgaa
ctaactttagaaagcgaatcttttttgaaagcagaagaccgtaaattaatttatcaagct
cattccggaattgttcatttgattccaaaagtgaagaatcaagagattgaagcagtcgaa
tacaaatttgcagatcaaacaaaagatatgaaagagttgtttgtggattattttaaatcc
aaaaatggaaatcaagaaccaaatgaagaacttaaagagttgtttaatgaaattttgaat
aactga
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