Empedobacter brevis: F0358_08970
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Entry
F0358_08970 CDS
T06196
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_08970
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0358_08970
Archaeal homologous recombinant proteins
F0358_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
NapD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QES92839
LinkDB
All DBs
Position
1916382..1919417
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPVKLTIEGLYSYQERQTIDFTDLTSAGLFGIFGNVGSGKSSILEAITFALYGNSDRLG
ATNFAYNMMNLKSNKLFIEFEFLNAEEQLFKITREYKRNGKNFEKIVNSGVVLYRFENDW
IPQESSDVEPILGLSSENFRRTIIIPQGQFKEFIELKPTARTQMMKEIFGLHRYDLQDKV
AVLNTQNLTNLNQLQGKLSGFEEVSEEKIKQLEEELAQHMNITNQIQDEYNQINEAFQRL
KALKSDFEHLKQKKIEFEKVSVQKIEMDRQKAEMERYELIFNGFHRLLENQAKLENQING
KTTSLDVQYKQLTLLENQMQEVSDQIERLKNAYEALPTKRKEEADLELILQILTFSHEIE
QLKERTFKGLKKVEEVQENEQKIEDSIKSLEKEITILSQSKIESQTLIEVGNWFIQSQNL
KQLVQKQQTKILEQQNQINVLNDQLKENEIEISTFENKFNTAFDVLKSTRQSLEKQKTDL
ELQQKLAQYTHNLHDGEACPLCGAFEHPNIVEVDDVTSNINAINEELKEVEEKARLLQKN
QYEVQKVIDQKQFIEKQNQHEIQVLNELKIQVKEQLNLFVWKDFEAENFELFEEKKNQSI
LLEQTISDKNKEIVTHRESVVKERQDLDKYKKALEKFKLEETEKASQIRQNQLNLKVLKF
EEFQKETTESVQQKLIDLNANNSKIEQDYIRLTESLNKLTPAFASQKTTIESVEKQIKEL
SDELKQNQIEIEHGLKHHQIQSTEEVQQVLNQQLNVMKIRKELDDFRVLFETLKSSIKEL
EQKLNKVSFDEIVFQKQEEKLVVVTQQLKEATETATKTKTEIERLAKSFAEKKELLLELD
KLQKRATNLQTMRNLFNSAGFVQYVSSIYLKQLCDNANVRFHRMTRNQLSLQINENNEFE
IVDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQTNAKSEKNFFFIDEGFGTQDADA
VNIVFETLMGLQKENRIVGIISHVDELKDRIPVALQVTKDEEKGSLIEVIS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtaaaattaaccatagaaggactttattcgtaccaagaacgtcaaacaata
gactttacagatttaacaagtgcaggattgtttggtatttttggaaatgttggttctgga
aaatcatctattttagaagcgattacgtttgctctgtacggaaactctgatcgtctaggc
gctacaaactttgcttataatatgatgaatttgaaatccaataaattatttattgaattt
gaatttctcaacgcagaagagcaattatttaaaataacaagagagtataaaaggaacgga
aagaattttgagaaaattgtaaattccggtgtggttttataccgatttgaaaacgattgg
ataccacaagaaagttcagatgtagaaccaattttaggattaagttcagagaacttcagg
agaacaattattattcctcaaggacaattcaaagaatttattgaattaaaaccgacagca
agaacgcaaatgatgaaggaaattttcggacttcatcgttacgatttgcaagataaagtg
gcggttctcaatactcaaaacctgaccaatctaaatcagttgcaaggaaaattatctggt
tttgaagaagtttcggaagaaaaaataaaacaacttgaagaagagttagctcagcatatg
aacataaccaatcaaattcaagatgaatacaaccaaatcaatgaagcgtttcaacgatta
aaagcgttgaaatctgattttgagcatttgaaacaaaagaaaatcgagtttgaaaaagtt
tctgttcagaaaattgagatggatcggcaaaaagctgaaatggagagatatgaattgatt
tttaatggttttcatcgattactggaaaatcaagctaaacttgaaaatcaaatcaacgga
aaaacaacgtcgttagatgtccagtataaacaattgactttactggaaaatcagatgcaa
gaagtttcggatcagattgaaagattaaaaaatgcatatgaagctttaccaacgaagcga
aaagaagaagctgatttagaattgattcttcagattttgactttttctcatgaaattgaa
caattaaaagaacggacatttaaaggattaaagaaagttgaagaagttcaggaaaatgaa
caaaaaatagaagattcaatcaaatctttggaaaaagaaataacgattttatctcaatcg
aaaatcgaatcacaaacgttgatagaagttggaaattggtttattcaatctcaaaattta
aaacaattagttcaaaaacaacaaactaaaatacttgaacagcaaaatcaaatcaatgtt
ttgaatgatcaattgaaagaaaatgaaattgaaatttccacttttgaaaataaatttaat
acagcatttgacgttttaaaatcaaccaggcaatcactcgaaaaacaaaaaactgatcta
gagcttcaacaaaagttagcgcagtatacacataatttgcatgatggggaagcgtgtccg
ctttgcggcgcttttgaacatccgaatattgttgaggtagatgatgttacatcaaatatc
aatgcaatcaatgaagaattaaaagaggttgaggaaaaagcgagattacttcagaaaaat
caatatgaagttcaaaaagtaattgaccaaaagcaatttatagaaaaacaaaatcaacac
gaaattcaggttctgaatgaattgaaaatacaagtaaaagaacagttgaatttgtttgta
tggaaagattttgaggcggaaaattttgagttgtttgaagagaaaaagaatcaaagtatt
ttattagaacaaacaatttccgataaaaataaagagattgtaacgcaccgggaatcagta
gtaaaagagcgtcaggatttagataaatataaaaaagctttagaaaaatttaagttagaa
gagacagaaaaagcttctcaaattaggcaaaatcaattgaatttaaaagtgttaaagttt
gaggagtttcagaaagaaacaaccgaaagtgttcagcagaaattaatagatttaaatgct
aataactcaaaaattgaacaagattatattcgattaaccgaaagtttaaataagctgact
ccggcattcgcttctcagaaaacgacgattgagtcggtagagaaacaaatcaaagagttg
agcgatgaattaaaacaaaatcaaattgaaattgaacatggattaaagcatcatcagatt
caatctacagaagaggttcagcaggttttgaatcagcaattgaatgtgatgaaaatcaga
aaagaattggatgactttagagttttgtttgagaccttgaaaagttcaatcaaagaattg
gagcaaaaattaaataaggtttcttttgatgaaattgtttttcagaagcaagaagaaaaa
ttagttgtggttactcagcagttgaaagaagcaacagaaactgcaacaaaaacaaaaact
gaaatagaacggttggcaaaatcttttgcagagaaaaaagagttgttactcgaattggat
aaattacagaaacgagcaactaatttgcaaacgatgcggaatttgtttaattctgctggc
tttgtgcaatatgtttcgtctatttatttgaaacagttgtgtgacaatgcgaatgttcgt
tttcaccgaatgacaagaaatcaattgagcctgcaaataaatgagaacaacgaatttgag
attgtagattatttgaatgaaggaaaaagccgtagtgtgaaaacactttcaggagggcag
gcttttcaagtttcgttaagtttagctttagcattggctgaaagtgtgcaaacaaatgca
aaatcggaaaagaatttcttttttattgatgaaggttttggaacacaggatgcagatgca
gtgaatatagtttttgaaaccttgatgggattacaaaaagaaaatagaattgtcggtatt
atttctcatgtagatgaattaaaagatcgaattcctgtcgcactacaagtgacgaaagat
gaagaaaaaggaagcttaatagaagtcatctcttaa
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