Empedobacter brevis: F0358_08990
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Entry
F0358_08990 CDS
T06196
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebv03009
]
F0358_08990 (rlmH)
Enzymes [BR:
ebv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
F0358_08990 (rlmH)
Ribosome biogenesis [BR:
ebv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F0358_08990 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Methyltrans_RNA
PH_SLA1
NTPase_1
Kinase-PPPase
NCH1
DUF1054
Motif
Other DBs
NCBI-ProteinID:
QES92843
LinkDB
All DBs
Position
complement(1921782..1922255)
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AA seq
157 aa
AA seq
DB search
MNITTICIGKTDEKAIEMLLQKYENRLPSHINYQRIEIPDIKNRKNLSEIQQKQKEAEHI
LSKIVNTDFVIILDEKGKQPTSKQFADDIQNYMNQSVKNLVFVIGGPYGFDESVYNRGNK
KMSLSNMTFTHQMVRLFLTEQIYRGFSILQGKPYHHE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacgaccatttgtatcggtaaaacagacgaaaaagctatcgaaatgctttta
caaaagtatgaaaatcgattgccttcgcatattaattatcaaagaattgaaattcctgac
atcaaaaatcgtaaaaatttgtccgaaattcaacaaaaacaaaaagaagctgaacacatt
ttaagtaaaatcgtaaatactgattttgtcattatcttggatgaaaaaggaaaacagccc
acttcaaaacaatttgcagatgacattcagaattacatgaatcaatcggtaaaaaatctg
gtttttgttattggaggtccttatggctttgatgaatccgtttacaaccgcgggaacaaa
aaaatgtccttatccaatatgacatttactcatcaaatggttcgcttatttttaacagaa
caaatttatagaggatttagtatcttgcagggaaaaccttatcaccatgaataa
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integrated database retrieval system
