Empedobacter brevis: F0358_09745
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Entry
F0358_09745 CDS
T06196
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F0358_09745 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ebv01007
]
F0358_09745 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebv03016
]
F0358_09745 (lysS)
Enzymes [BR:
ebv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
F0358_09745 (lysS)
Amino acid related enzymes [BR:
ebv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
F0358_09745 (lysS)
Transfer RNA biogenesis [BR:
ebv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F0358_09745 (lysS)
Prokaryotic type
Other AARSs
F0358_09745 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
QES92972
LinkDB
All DBs
Position
complement(2074942..2076642)
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AA seq
566 aa
AA seq
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MQLSEQEIIRREKLQQLRDLGVEPYPAEEFVVTSNSKEIKEKYEEGKVVKLAGRLMSVRV
MGKASFAELQDSEGRIQVYISRDDISSSEEGIEYNTIFKKLMDIGDFIGIEGYEFKTKVG
EISVHVTKLTLLSKTLRPLPIVKTDDEGHVFDAFTDPELRYRMRYVDMVVNPHVKEIFLK
RTRLFNAMRNFFNDRGYMEVETPILQSIPGGAAARPFITHHNALDIPLYLRIANELYLKR
LIVGGFEGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEQLLEHCAIAVN
GTSEATFGEHKIDFKAPYKRVTMRQAIIDFTGFDIEGKSEAELFEAAKGMGIEVNETMGK
GKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLTKQHRDNPDLTERFELMVCGKEIANSYS
ELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTGGLGIGMDRLIMFLTN
NPSIQEVLFFPQMRPEKTAPAYELTAEETQIIEILKANDNIDLNELKSQTALSGKKWDKS
MKNLAKYNLTKVTVDGDVKTVAYLGE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtctgaacaagaaattattcgtagagaaaaactacaacaattaagagactta
ggcgttgagccttaccctgccgaagaattcgtggtaacttctaattcgaaagaaattaag
gaaaagtacgaagaaggaaaggttgtcaaacttgccggacgattgatgagtgttcgtgta
atgggaaaagcttcttttgctgaattacaagatagcgaaggacgtattcaagtttatatt
tcgagagatgacatttcttcatctgaagaagggattgagtacaatacaattttcaagaaa
ttgatggatatcggagattttatcggaattgaaggatatgaattcaaaactaaagttggt
gaaatttctgtccatgtcacaaaattaacgttattgtcaaaaaccttacgtccattgcca
attgtaaaaacggacgatgaaggccacgtttttgatgcatttacagatccggagttacgt
tatcgtatgcgttatgtggatatggttgttaatcctcacgtgaaagaaattttcttgaaa
cgtacacgtctattcaacgctatgcgtaattttttcaatgatcgtggatatatggaagta
gagactcctatcttacaatcaattcctggaggtgcagcagctcgtccttttattacacat
cacaatgcgttagatattccattatatttaagaatcgctaacgaattatatttaaaaaga
ttaatcgtcggtggttttgaaggtgtttacgaattttcaaaaaacttccgtaacgaagga
atggaccgtacacacaatccagagtttacagcaatggagatttatgttgcttataaagat
tataactggatgatggatttcacagaacaattattagagcactgtgcaattgctgttaac
ggaacttctgaagctactttcggagaacataaaattgatttcaaagcaccttataaacgt
gttacaatgcgtcaagcaatcattgattttacgggatttgacatcgaaggaaaatctgaa
gccgaattatttgaagctgcgaaaggaatgggaatcgaggtgaatgaaacgatgggtaaa
ggaaaactaattgacgaaatttttggcgaaaaatgcgaaggaaattatattcaaccaact
ttcattacagattaccctaaagaaatgtctccattgacaaaacaacaccgcgataatcca
gatttaacagaacgtttcgaattaatggtttgtgggaaagaaattgcaaactcttattct
gagttaaatgacccaatagatcaacgtgagcgttttgaggaacaattaaaattatctgaa
aaaggtgatgatgaagcaatgttcatcgaccaagattttttacgtgctttagagtatgga
atgcctcctacaggtggtttaggtattggtatggatcgcttaattatgttcttaacaaat
aatccatctattcaagaggttttattcttccctcaaatgcgtccggaaaaaactgcaccg
gcttatgaattgacagcggaagaaactcaaattatcgaaattttaaaagcaaatgataac
attgatttgaacgagttaaaatctcaaactgcattgagcggtaaaaaatgggataaatca
atgaaaaatttagcaaaatataacttgactaaagtaactgtagacggcgatgtcaaaacg
gttgcatatttaggagagtaa
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