Empedobacter brevis: F0358_11355
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Entry
F0358_11355 CDS
T06196
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00061
Fatty acid biosynthesis
ebv00071
Fatty acid degradation
ebv01100
Metabolic pathways
ebv01212
Fatty acid metabolism
ebv02024
Quorum sensing
ebv04146
Peroxisome
Module
ebv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F0358_11355
00071 Fatty acid degradation
F0358_11355
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F0358_11355
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0358_11355
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ebv01004
]
F0358_11355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ebv04147
]
F0358_11355
Enzymes [BR:
ebv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F0358_11355
Lipid biosynthesis proteins [BR:
ebv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F0358_11355
Exosome [BR:
ebv04147
]
Exosomal proteins
Exosomal proteins of breast milk
F0358_11355
Exosomal proteins of breast cancer cells
F0358_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QES93262
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All DBs
Position
2408230..2410005
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AA seq
591 aa
AA seq
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MEIKRLFDFPQNQLENNPREDALVSKVNGTWVKTSTQEYVGKANAFSRGLLQLGIKPQDK
IAIVTSTNRTEWNICDIGIQQVGAISVPLYPTLSEDDFEYILNNAECKFIIVSDKGLYDT
VAAVKDKVSTLVGIYSFEEISGVPNYKEILDLGADNSTQHEVESIKQIIKPSDMATLIYT
SGTTGRPKGVVLTHENIVSDVLMSVDRIPNFPDQAIALSFLPINHVFERMLIYLYQHLNI
GIWYAESIDKLGDNMKEVKPHVMTVVPRLVEKVYDKIYNTGASAGGLKTKIFMWALSLVE
DYDPFNPKGGLFGLKHSIAKSLVFSKWKEGVGGNLVCMVSGSAPLAARLNHIFWGAGIPI
LEGYGLTETSPVISVNCMKKEGFGIGTVGAPLKGIEVKIAEDGEILVKGPNVTQGYYKDP
EKTAEAFTPDGYFKTGDIGVLERGLLKITDRKKEMFKTSGGKYIAPQIIENKFKQSRFIE
QVMVVGEGEKMACAIIQPNFQVLKDYLRIKGIEEPASNSDLIKEPAILDIIGREIEKMNK
GLGHWEQIKKFELTPEEWTIDDGLLTPTLKLKRKNVLAKYQDLYNKLYDKK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaacgattatttgattttccgcaaaatcaattagaaaataatcctcgagag
gatgctttagtgtctaaagtgaacggaacttgggtgaaaacatctacacaagaatacgtt
ggcaaagcaaatgcatttagtcgaggattattacaattaggaatcaagccacaagataaa
attgcaatcgtaacttcaactaatcgtaccgaatggaatatttgtgacattggtatacag
caagttggtgcaatttctgttccgttatatcccacactttccgaagatgattttgaatat
atcttgaacaatgccgaatgtaagtttattattgtttctgataaaggtctatatgatacc
gtagcagctgtaaaagataaggtttctacattggttggtatttatagttttgaagaaatt
tccggggtacctaattacaaagaaatcttagatttaggagcggacaattcaacacaacat
gaagtagaaagcatcaaacaaattattaagccatcggatatggctaccttaatttataca
tcaggaacaacaggtcgtccaaaaggagttgttttgactcatgaaaatattgtatccgac
gttttgatgtctgtggatcgtattccaaatttccctgatcaggcaatcgcattaagtttt
cttcctattaatcatgtttttgaacgcatgctgatttatttgtatcaacatttgaatatt
gggatttggtatgcagaaagcatcgataaattgggagataacatgaaagaggttaaacct
catgtgatgactgttgtaccacgtttagttgaaaaagtttacgataaaatttacaataca
ggagcttctgccggaggacttaagactaaaatttttatgtgggctttaagtcttgttgaa
gattatgatccttttaatccgaaaggtggattatttggattaaaacattcaatagcgaaa
agtctggtcttcagtaaatggaaagaaggagtaggagggaatcttgtgtgtatggtttca
ggatcagcacctttagctgctcgtcttaatcatattttttggggtgcaggaattcctatt
ttggaaggatatggattgacagaaacatcgcctgtaatttcggtaaactgtatgaaaaaa
gaaggtttcggaataggaactgttggtgcgccattaaaaggaattgaagttaaaattgct
gaagatggagagatcttggttaaaggcccgaatgtaacacaaggttactataaagatcct
gagaaaacggctgaagcatttacaccggatggttatttcaaaacaggagatattggtgta
ttagaaagaggtttattaaaaattacggaccgtaaaaaggaaatgttcaaaacttccgga
ggtaaatatatcgcaccgcagattatagaaaataaatttaaacaatctcgttttatagaa
caagtaatggtagttggggaaggagaaaaaatggcttgcgcaatcattcaacctaatttc
caagtattgaaagattacctgagaataaaaggaattgaagaaccggcttctaattccgat
ttaatcaaagaaccggcaattttagatattattggtcgggaaattgaaaaaatgaataaa
ggattaggtcattgggaacaaataaagaaatttgaactaactcctgaagaatggacgatt
gatgatggactattgacacctacattaaaactgaaacgcaaaaacgtattagcaaaatat
caggatttgtataataaattatacgacaagaaataa
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