Empedobacter brevis: F0358_12140
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Entry
F0358_12140 CDS
T06196
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid transaminase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00330
Arginine and proline metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
F0358_12140 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ebv01007
]
F0358_12140 (rocD)
Enzymes [BR:
ebv01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
F0358_12140 (rocD)
Amino acid related enzymes [BR:
ebv01007
]
Aminotransferase (transaminase)
Class III
F0358_12140 (rocD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QES93409
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Position
complement(2574005..2575237)
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AA seq
410 aa
AA seq
DB search
MEKSAELIALEEKYGAHNYHPLPVVLEKGEGIYVWDVDGKKYYDFLSAYSAVNQGHCHPR
IINKLKEQAEKLTLTSRAFYNAELGKFEKFITELFGFDKILPMNTGAEAVETALKIARKW
GYEKKGIPAGEAIIVVCKDNFHGRTTTIISFSNDEDARKNFNPYTSGFVAVDYNDVEALK
QILEEKADKICGFLVEPIQGEAGVNVPSDGYLKACEELCKQHNVLFIADEIQTGIARTGK
MLAIDHENIDADLLILGKAVSGGVYPVSAVLANDDVMNVIKPGQHGSTYGGNPLAAAVAM
EALQVVLDEKLADNAERLGQIFRAEITKMAEEFPLFKSVRGKGLLNAILINDTPDSKTAW
DFCVAMKDNGLLAKPTHGNIIRFAPPLVMNEEQLHECLAVIRKTAEEFKK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcagcagaattaatcgcattagaagaaaagtacggagcacataattatcat
ccacttccggttgtcttggaaaaaggtgaaggtatctatgtttgggacgttgatggtaaa
aaatattatgatttcttatcagcttattcagctgttaatcaaggacattgccatcctcgt
atcattaacaaactaaaagaacaggcagaaaagttaacattgacttctcgtgcattttac
aatgccgaattaggaaaatttgaaaaatttatcactgaattatttggttttgataagatc
ttaccgatgaatacaggagccgaagcagtagaaacggctttaaaaattgcacgtaaatgg
ggatacgaaaagaaaggtattcctgctggagaagcaataattgtcgtttgtaaagataat
ttccatgggagaacgacaacaattatttctttctctaacgatgaagatgcccgtaagaat
ttcaatccttatacaagcggattcgttgcggtagattacaacgatgttgaagctttaaaa
caaattctggaagaaaaggcagataagatttgtggattcttagtagagccaattcaagga
gaagctggcgttaatgtaccttctgatggttacttaaaagcttgtgaagaattgtgtaaa
caacacaatgttttgtttatagccgacgaaattcaaaccggtattgcacgtacaggaaaa
atgttagctattgatcacgaaaatattgatgcagatctattgatcttagggaaagcagtt
tccggaggagtttatcctgtgtcagctgttttagcaaatgatgacgttatgaatgtgata
aagcctggtcagcacggttctacttatggaggaaatccattagctgctgctgttgccatg
gaagctttacaagtcgtattggatgaaaagctagctgataatgctgaaagattggggcaa
attttcagagctgaaatcacaaaaatggccgaagaatttcctttatttaaatctgttcga
ggaaaaggtttattaaatgcaattttaattaacgatacaccagactctaaaactgcctgg
gatttctgtgttgccatgaaagacaatggtttattagcaaaacctacacacggaaatatt
atccgatttgctcctcctcttgttatgaacgaagaacagttacacgaatgtttagccgtt
attcgtaagaccgcagaagaatttaaaaaataa
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