Empedobacter brevis: F0358_12925
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Entry
F0358_12925 CDS
T06196
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00860
Porphyrin metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01120
Microbial metabolism in diverse environments
ebv01240
Biosynthesis of cofactors
Module
ebv_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
F0358_12925 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ebv04147
]
F0358_12925 (hemB)
Enzymes [BR:
ebv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
F0358_12925 (hemB)
Exosome [BR:
ebv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
F0358_12925 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QES93558
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All DBs
Position
complement(2729824..2730816)
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AA seq
330 aa
AA seq
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MFIYNRHRRLRKNESIRSMVRENHLSPNDFILPIFVAEGEGVKEEIAAMPGIYRHSIDNT
VKEVKEIWDLGIKSVNLYCKVSDHLKDNTGKEAWNPNGLMQNTIKAIKDAVPEMIVMPDV
ALDPFSIYGHDGIIKNGEILNDETVEALVKMTLSHAEAGADFVAPSDMMDGRIGAMRMAL
EENGYHNVGIMTYAAKYASSFYGPFRTALDSAPVDTQDIPKDKKTYQMDFHNSEEALREA
IADVEEGADILMVKPGMAYLDIVKLIKDNLQVPVSVYQVSGEYAMIKAAAEKGWIDHDKI
MLETLTCFKRAGANLISTYFAKDAARLLNE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtttatatataacagacatagaagacttcgtaaaaacgaatctattcgtagtatggtt
cgtgaaaatcatttatcaccaaacgattttattttaccaatttttgtggctgaaggtgag
ggtgtaaaagaagaaattgctgcaatgcccggtatttaccgccattctattgataataca
gtaaaggaggtaaaagagatttgggatttaggaattaaatctgttaatctatattgtaaa
gttagcgatcatttaaaagataacactgggaaagaagcgtggaatccgaatggattgatg
cagaataccatcaaagccattaaagatgcggttcctgaaatgattgtaatgccagacgtt
gcattggatcctttttcaatttatggacatgacggaatcatcaaaaacggagaaattctc
aatgatgaaacagttgaggcgttggtaaaaatgaccttgtctcatgctgaagccggagct
gactttgttgcaccctcagatatgatggacggacgaataggagcgatgcgcatggcttta
gaagaaaatggttaccataatgttggaattatgacgtatgcagcaaaatatgcctcatct
ttttatggaccattccgtactgctttagattctgcacctgttgatacacaagatatccca
aaagataaaaaaacgtatcaaatggattttcataattcagaggaagccttacgtgaagca
attgctgatgtagaagagggcgctgatattttgatggtaaaaccgggtatggcttatttg
gatatcgtaaaactaataaaagataatttacaagttcctgtatctgtttatcaggtttcc
ggagaatatgccatgataaaagctgctgcagaaaaagggtggattgatcacgataaaata
atgttagagacattgacatgctttaaaagagcaggagccaatttgatttcaacttatttt
gcgaaagatgctgcacgactattaaatgaataa
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