KEGG   Empedobacter brevis: F0358_14350
Entry
F0358_14350       CDS       T06196                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ebv  Empedobacter brevis
Pathway
ebv00010  Glycolysis / Gluconeogenesis
ebv00020  Citrate cycle (TCA cycle)
ebv00260  Glycine, serine and threonine metabolism
ebv00280  Valine, leucine and isoleucine degradation
ebv00310  Lysine degradation
ebv00380  Tryptophan metabolism
ebv00620  Pyruvate metabolism
ebv00630  Glyoxylate and dicarboxylate metabolism
ebv00640  Propanoate metabolism
ebv00670  One carbon pool by folate
ebv00785  Lipoic acid metabolism
ebv01100  Metabolic pathways
ebv01110  Biosynthesis of secondary metabolites
ebv01120  Microbial metabolism in diverse environments
ebv01200  Carbon metabolism
ebv01210  2-Oxocarboxylic acid metabolism
ebv01240  Biosynthesis of cofactors
Module
ebv_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ebv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ebv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ebv_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    F0358_14350 (lpdA)
   00020 Citrate cycle (TCA cycle)
    F0358_14350 (lpdA)
   00620 Pyruvate metabolism
    F0358_14350 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    F0358_14350 (lpdA)
   00640 Propanoate metabolism
    F0358_14350 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    F0358_14350 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    F0358_14350 (lpdA)
   00310 Lysine degradation
    F0358_14350 (lpdA)
   00380 Tryptophan metabolism
    F0358_14350 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    F0358_14350 (lpdA)
   00670 One carbon pool by folate
    F0358_14350 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ebv04147]
    F0358_14350 (lpdA)
Enzymes [BR:ebv01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     F0358_14350 (lpdA)
Exosome [BR:ebv04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   F0358_14350 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored NAD_binding_8 FAD_binding_3 HI0933_like AlaDh_PNT_C DAO 3HCDH_N Thi4 Lys_Orn_oxgnase UBA_9
Other DBs
NCBI-ProteinID: QES93819
LinkDB
Position
complement(3000035..3001435)
AA seq 466 aa
MSSYDVAVIGAGPGGYVAAIRCAQLGFKTAIIEKENLGGTCLNVGCIPSKALLDSSHHFY
DAVNHFKEHGIEIDAPKVNFTQMITRKQGVVDTNVAGIKYLMSKNNIDVLEGAGAFKDAT
HIVVTAKDGSTQEIEAKNTIIATGSVSSELPFAPTDKTRIITSTEALALTEVPKHLIVIG
GGVIGLELGSVYLRLGSDVTVVEYADRVIPGMDGALSKELTKVLKKQGMKFYTSTGVTSV
VNNGNDVTLKATSKKGEEIEINGDYALVAVGRRAFTGSLGLENVGIEVDERGRIKTNDHL
QTNVSNVYAIGDVVAGAMLAHKAEEEGVLVAEQLAGQKPHINYNLIPGVVYTWPEVAGVG
KTEEQLKEEGVEYKVGSFPFKALGRARASMDTDGFAKILADKNTDEILGMHIIGARAADL
IAEGVTAMEFRASAEDLTRMSHAHPTFAEAIKEAALAATDNRAIHA
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagttcttatgatgtagccgtaattggtgctggacctggaggatatgttgctgcaatc
cgttgtgcgcaattaggatttaaaacagcaattatcgagaaagaaaatttaggaggtaca
tgtcttaatgtaggatgtattccatctaaagctttattagattcttctcaccacttttac
gatgctgtaaatcactttaaagagcacggaattgaaattgatgctccgaaagtaaacttc
actcaaatgattactcgtaaacaaggtgttgtcgatactaacgtagccggtatcaaatac
ttaatgagtaaaaataatattgatgttttagaaggtgcaggtgcttttaaagatgcgact
catattgttgtaacagctaaagatggttctacacaagaaatcgaggctaaaaatacaatt
attgcgactggttcagtttcatcagaattgccatttgcaccaacagataaaacccgtatt
attacttctacagaagctttggctttaacagaagttccaaaacacttgattgttattggt
ggaggagttatcggattagaattaggatctgtttacttacgtttaggttctgatgtaaca
gttgtagaatatgcagatcgtgtaattccgggaatggatggagctttgtcgaaagaattg
acaaaagtattgaaaaaacaaggaatgaaattctacacttctacaggtgtaacttctgta
gtgaataatggaaacgatgtgacattaaaagcaacttctaaaaaaggagaagagattgaa
attaacggtgactacgctttagtagcagttggtcgtcgtgctttcacaggatctttaggt
ttagaaaatgtaggaattgaagttgatgaaagaggtcgtatcaaaacaaatgatcactta
caaacaaatgtttctaatgtttatgccatcggtgatgttgttgcaggagcaatgttggca
cacaaagcagaagaagaaggtgttttggtagctgagcaattagcaggtcaaaaacctcat
atcaactataatttaattcctggtgtagtttatacttggcctgaagttgctggagttggt
aaaacagaagaacaattgaaagaagaaggagtagaatacaaagtgggttctttcccattc
aaagctttaggacgtgctcgtgcttctatggatacagatggttttgctaaaatcttggca
gataaaaatacagacgaaatcttgggaatgcatattattggtgctcgtgctgcggattta
attgcagaaggagttacagcaatggaattccgtgcttcggcagaagacttaacaagaatg
tctcatgcccacccaacatttgcagaagcgataaaagaagctgcgttagctgcaactgac
aatcgtgcaattcacgcttaa

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