KEGG   Empedobacter brevis: F0358_16975
Entry
F0358_16975       CDS       T06196                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ebv  Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebv03021]
    F0358_16975
Transcription machinery [BR:ebv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     F0358_16975
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_24 GerE PAP_assoc HTH_AsnC-type HTH_10 Phage_antitermQ HTH_28
Other DBs
NCBI-ProteinID: QES94292
LinkDB
Position
complement(3578608..3579150)
AA seq 180 aa
MTLENIILEAKKGKRNAQNAVIEVLWNKVYHYVYNKVRNEEEAEDIAIETFTKVFTKLKL
YNEDFDFTTWVISIAHNTMIDHIRKSSKLNISIDDERNLLEILEDHPSPEEHLILKQDND
TLIKAIAKLREPYQRIIELRYIEDKTYKEIAEELNLSLPNVKVRLLRAKQLLTEVMQNNI
NT seq 543 nt   +upstreamnt  +downstreamnt
atgacattagaaaacataattttagaagctaaaaaagggaaacgaaatgctcaaaatgct
gtgatagaggttttgtggaacaaagtttatcattatgtttataataaagtaaggaacgaa
gaagaagcagaagatattgcgattgaaacgtttacaaaggtctttacaaaattaaaatta
tacaacgaagattttgactttactacatgggtaatttctattgctcataatacaatgatt
gatcatatcagaaagtcatcaaaactaaatatttcgatagatgatgaaagaaatcttctt
gaaattttagaggatcacccttcacctgaagagcatttgattcttaagcaagataatgat
acactaataaaagctattgctaaattaagagaaccttaccaaagaattatcgaactccgt
tatatcgaagataaaacatataaagaaatagcagaagagctaaatttaagcttaccaaat
gttaaagttcgtcttttaagagccaaacaattgttaacagaagtaatgcagaataatatt
tag

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