Ectothiorhodospiraceae bacterium BW-2: D5085_05120
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Entry
D5085_05120 CDS
T11052
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx00521
Streptomycin biosynthesis
ebx00523
Polyketide sugar unit biosynthesis
ebx00525
Acarbose and validamycin biosynthesis
ebx00541
Biosynthesis of various nucleotide sugars
ebx01100
Metabolic pathways
ebx01110
Biosynthesis of secondary metabolites
ebx01250
Biosynthesis of nucleotide sugars
Module
ebx_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D5085_05120 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D5085_05120 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D5085_05120 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D5085_05120 (rfbB)
00525 Acarbose and validamycin biosynthesis
D5085_05120 (rfbB)
Enzymes [BR:
ebx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D5085_05120 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
QEP42568
UniProt:
A0A5C2HI32
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All DBs
Position
1087763..1088830
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AA seq
355 aa
AA seq
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MSHTPKNLLITGGAGFIGSNFIHYWLKQHPEQRLIVLDALTYAGNRANLAAVAQHPQLTF
IHGDILDTPLVEQLLTEHQIDTLVHFAAESHVDRSIHGPDAFLKTNIEGTHSLLKAAKKI
WLDQVSTQTDAHRFHHVSTDEVYGTLKPNDPPFSETTPYRPNSPYAASKASSDHIVRSYH
HTYSLNTTFSNCSNNYGPYQFPEKLIPLIIANCLDGKPLPIYGDGQQIRDWLYVDDHNRG
IDLIIHQGEIDNSYNIGGNNEWTNLDIVTLICELMDQHHPEGAPHQRLITHVKDRLGHDR
RYAINADKITTQLGYQPQESFESGIRKTIQWYLDNESWWRAVMDGSYRQWLETNY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaccccaaaaaatctgctaatcaccggtggtgccggctttatcggtagtaac
tttatccactactggctcaaacagcaccccgagcagcggctgatcgtgctcgacgccctc
acctatgccggcaatcgagccaatttagcagcggtcgcacaacatccacagctcaccttt
attcacggcgatattctcgatacccccttagtcgaacagctactgaccgagcaccagatc
gataccctagtccattttgctgccgagagccatgtcgatcgctccattcacggccctgat
gccttccttaaaaccaatattgaggggactcacagcctgcttaaagcagcgaaaaagatc
tggctcgatcaagtctccacccagaccgacgcccaccgctttcaccatgtctctaccgat
gaggtctatggcactctgaagccgaacgatcccccctttagcgaaaccaccccctaccga
cctaactccccctacgccgcgagtaaggcgagctccgaccatattgtgcgcagctaccac
catacctatagcctaaataccacttttagcaactgctccaataactatggcccctaccag
tttcctgagaagttaatccccttaattatcgccaactgcctcgatggcaaaccgcttccg
atctatggcgatggtcaacagattcgtgactggctctatgtcgatgatcacaatcgcggt
attgacctgattatccatcaaggagagatcgataacagctacaatatcggcggcaataac
gagtggactaatctcgatatcgtcaccttaatctgtgagctgatggatcagcaccaccct
gagggtgccccccaccagaggctcattacccatgttaaagatcgcttaggccatgatcgc
cgctacgccattaacgccgacaaaatcacaactcagctcggttatcagccacaagagagc
tttgagagcgggattcgcaagactattcagtggtatcttgacaacgagagctggtggcgg
gcggtcatggatggcagctatcggcagtggttagagaccaactattga
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