Ectothiorhodospiraceae bacterium BW-2: D5085_06715
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Entry
D5085_06715 CDS
T11052
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03030
DNA replication
ebx03430
Mismatch repair
ebx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5085_06715 (holA)
03430 Mismatch repair
D5085_06715 (holA)
03440 Homologous recombination
D5085_06715 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebx03032
]
D5085_06715 (holA)
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_06715 (holA)
Enzymes [BR:
ebx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5085_06715 (holA)
DNA replication proteins [BR:
ebx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5085_06715 (holA)
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5085_06715 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DIMCO_N
Motif
Other DBs
NCBI-ProteinID:
QEP42847
UniProt:
A0A5C2HIJ0
LinkDB
All DBs
Position
1402269..1403273
Genome browser
AA seq
334 aa
AA seq
DB search
MSIELQNRTLSGAIWVIGDEPLQFNETLDQLRQSARQQGYGEREVYDVEPGFNWEALFAN
SRMKSLFAAKTVVDVRLHHPPDAATLKQITQAITSWPADKLLLLSYAVAEGTPTKKLAWV
KRLPDTLLLIQIKKIPPYKLPNWLQQRARQQRITLTTEAARRLAQLTEGNLIAAIQELQK
LQLNDPERQQFDIEQLKTLQQSAHYTPFALWDAILERNPQRAVQIVQTLRAEGEAVPQLL
WLIERELTCMVEASSYLSRRQSLQPLWQERNLFNSLRPATEKLLQSHSELFWQQALIRTA
AIDRLGKSEESDLAWWQLEELVAKLATPQVAHAH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgagctccaaaaccgcacgctctccggtgccatttgggtgatcggtgatgag
ccgctacaatttaatgaaaccctcgaccagctacgccaaagcgcacgacagcagggatat
ggggagcgagaggtctatgatgtcgaaccgggatttaactgggaggcactctttgccaat
agccgtatgaagtcgctcttcgccgctaaaacggtagttgatgttcgactccaccacccc
cccgatgccgcaacactaaaacagataactcaagcgatcacctcatggcccgccgataaa
ctactgctgttaagctatgccgttgccgagggaacaccaactaaaaagctagcctgggta
aagaggctacccgataccctgctgctcattcagatcaaaaagatccccccctataaactc
cccaattggctacagcaacgggctcgccaacagcggataaccttgacgaccgaggcggct
cgacgactcgcacagttaaccgaaggcaatctcattgccgccatccaagagctgcaaaag
ttacagctaaacgaccctgaacgacagcagttcgatattgagcagcttaaaacgctgcaa
cagagtgcccactacaccccattcgccctgtgggatgctattttagagcgcaatccccaa
agagcggtacagatagttcagacactcagagcagaaggggaggcggtaccacaactccta
tggcttatagagcgggagctgacctgcatggtcgaggcgagtagctatctgagccgtcgc
cagtcgctacagccactatggcaagagagaaatctattcaactccctgcgtcctgccacc
gaaaagctcctacagagccactcagagctcttctggcagcaggcactcattcgaaccgcc
gccattgatcgccttggcaagtcggaggagagcgacttagcttggtggcagttagaggag
ctagtcgccaaactggccaccccccaagttgcgcacgctcattag
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