Ectothiorhodospiraceae bacterium BW-2: D5085_07075
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Entry
D5085_07075 CDS
T11052
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03420
Nucleotide excision repair
ebx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5085_07075
03430 Mismatch repair
D5085_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_07075
Enzymes [BR:
ebx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5085_07075
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5085_07075
MMR (mismatch excision repair)
Other MMR factors
D5085_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEP42906
LinkDB
All DBs
Position
complement(1479784..1481946)
Genome browser
AA seq
720 aa
AA seq
DB search
MDISDLIEPLNSAQREAVCSESRALLVLAGAGSGKTRVLTHRIGWLIRTAEASAHSILAV
TFTNKAAREMRQRLEGLLEMPTSSLWIGTFHGIAHRLLRAHWQEAKLSREFQILDSDDQL
RLIKRTLRELTIDEAQTPPKQMQWFINSQKDEGRYPESIEAGGDPFLQQGVEIYRHYQRL
CEQQQVVDFAELLLRADELWRQNPETLAHYQRRFTHLLVDEFQDTNTIQYRWLQRLAGES
LGIFAVGDDDQSIYGWRGAKIENIHRFQHEFAPCELVRLEQNYRSSGHILAAANHLIAHN
SERLGKNLWTADSEGEPLQLYSAFNEQEEARYITERIEQWLQQGIARDEIAILYRSNAQS
RVLEEALLMAAIPYRIYGGMRFFERAEIKDALAYLRLGSNPHDDSAFERVVNQPPRGIGA
KTIEQLRARARSEQISLWRATERLLAQESLPARAANALRSFMALIQALPRQELPFDHLGQ
RVRAVVEQSGLIDYFSREKGERGRSRLENLDELAVAAQQFLPEEAGDEFTPLQQFLAHAA
LEAGEGQADEWQSSVQLMTLHSAKGLEFPCVVLAGMEEGLFPHQMALKELGRVEEERRLC
YVGMTRARQQLLLTWAEQRRLFGELRLNRLSRFVYEIPAERLQEIRLRGEVSRPRLFSQA
GEEEAWQMGERLRHAKFGVGVVVQAEGSGAKLRLQVAFESGEVKWLMASMARLERLDDFA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatattagtgatttaattgagccgctaaatagcgcccagcgcgaagcggtctgcagc
gagtcgagagcgctgctagtactagccggagccggtagtggtaagacgcgagtcttaacc
caccgcatcggttggttgattcgcactgctgaggcctcagcccactctatcttggcggtc
acctttaccaataaagcggcgagggagatgcgccagcggctagaggggctgttagagatg
ccgaccagctccctctggatcggcacctttcacggcatcgctcatcgcctgctgcgtgcc
cactggcaggaggcgaagttaagtcgggagtttcagatcctcgatagtgacgatcagcta
cggctcattaaacgaactctgcgcgagcttactatagatgaggcgcagaccccgccgaaa
cagatgcagtggtttattaacagccagaaggatgagggccgctatcccgagtcgattgag
gcggggggtgacccctttttacagcagggagtcgagatctatcgccactaccagcggctg
tgtgaacagcagcaggtggtcgattttgccgaactgctgctacgagccgacgagctgtgg
cggcagaatccagagaccttggcccactaccagcgccgctttacccacctattggtcgat
gagtttcaggataccaatacgattcagtaccgctggctacagcgactggctggggagtcg
cttggcatcttcgcggtgggggatgatgaccagtcgatctacggctggcgcggggctaaa
atcgaaaatatccaccgttttcagcacgaatttgcgccgtgtgaactggtgcggctagag
cagaactaccgctctagtggccatattctcgctgcggctaaccatctgattgcccataat
agcgagcggctggggaaaaatctctggacagccgatagcgagggggagccgctacagctc
tacagcgcctttaatgagcaggaggaggcgcgatatattaccgaacgaattgagcagtgg
ctgcaacaggggattgcacgcgatgagattgcgattctctatcgctctaacgcgcagtcg
cgggtactggaggaggcgctactgatggccgccatcccctaccgtatctacggcggaatg
cgcttttttgagcgggcggagattaaggatgccctagcctacctccgtttagggagcaac
ccccatgacgatagcgcctttgagcgggtggtcaaccagccgcctcgtggcattggagct
aaaacgatcgagcagctacgagcgcgggcgcgtagcgaacagatcagcctatggcgggcg
acagagaggctactagcacaagagagcctccccgcccgagcggctaacgccctgcgcagt
tttatggcactcattcaggcactgccacgacaagagctgccctttgaccatttagggcag
cgggtaagggcagtggtcgaacagagcgggttaatcgactactttagccgtgagaagggg
gagagggggcgcagccggctagagaatctggatgagctagcggtcgcggcgcagcagttt
ctccccgaagaggcgggtgatgagtttacccccttacagcagtttctagcccacgccgcc
ctagaggcgggcgaggggcaggccgatgagtggcagagttcagttcagttaatgacgctc
cactcggctaaagggttagagtttccctgtgtggtgctagccggtatggaggaggggctc
tttccacaccaaatggcgctcaaagagctggggagagtcgaggaggagcggcgactctgc
tatgtcggcatgacccgagcgcggcagcagctactgctcacctgggctgaacagcggcgg
ctcttcggtgaactgcgactcaatcggctctcccgctttgtctatgagattccggccgag
cgactacaggagatccggcttcgtggtgaggtgagccggccacggctcttttctcaagcg
ggagaagaggaggcgtggcagatgggagagcgactgcggcacgccaaatttggtgtgggg
gtcgtggttcaagctgaggggagcggcgctaaactgcggctgcaagtggcgtttgagagt
ggtgaggtaaagtggctgatggcgtcgatggccagactagagcggctagatgattttgct
taa
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