Ectothiorhodospiraceae bacterium BW-2: D5085_07290
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Entry
D5085_07290 CDS
T11052
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebx03021
]
D5085_07290 (rapA)
Transcription machinery [BR:
ebx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D5085_07290 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Cas3-like_C_2
NAT10_TcmA_helicase
WWE
AAA_22
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QEP42942
LinkDB
All DBs
Position
1521316..1524222
Genome browser
AA seq
968 aa
AA seq
DB search
MSQEFTPGQRWICDTELQLGLGTVVECEPRRVTLRFDSCDETRSYARDNSPLTRIIFSPG
DSIKTTTGEQLQVDEVMQLHGLVIYSAMSLDGTGVNVLESDLDHRLQLNRPADRLFSGQL
DNQKWVSLRYQSWQQLQQLRRSPLWGLSGVRTALIPHQLYIAYEVGRRYQPRVLLADEVG
LGKTIEAGLIIHQKYLSGQASRILIVVPEPLLHQWLVEMVRRFNLNLTLLDEERCQQLDS
EGDNPFLSQQLVLSGQSFLSHSVERRQQALQAQWDLLVVDEAHHLQWSEDEVSDDYLAIE
ELARTIPAVLLLTATPEQFGRESHFSRLRLLDPDRFCSFSDFIEQEQSYAPIADAVEQLL
TQAPLTAELEQLIRNTGIEGDNLTALQQLQSEESSVQQQARTELIDHLLDRHGTGRILFR
NSRERISGFPERQLVAHPLPLPEQYRQPLDDYLCALIPDELTPDSAQFHPLLYPEQLWQH
DSEQSDGWTRFDPRISWLIEQLQQQRQEKIVAITATAQSAIDIAHALRHRANLTTALFHE
QMTLLERDRAAAWFADREQGCQLLICSEIGSEGRNFQFAHQLVLFDLPLNPDLLEQRIGR
LDRIGQTRPVTIHLPYLEGSLQQLLYHWYHQGLNAFEQTATTAQSLQQRFWPQLRQSIIT
LHLDESLLQQLQQADATLRQQLRQGRNRLLEFNSCRPHIANRLVADAEQLQQDRPLTHWL
DQLFHLIGVDAEPHSAFSTILRPTEQFLGDFMPDLTSDGLTMTTHRATALANESLHFFSW
EHPMVQEALESLLSSERGNASLATFKEPRFEPGTLLLECWYRLEPAGHHAGELSRYLPPQ
LLRQVIDDNLQEWSSSLPFEELQPLLQPVKRDIARQVIERSRPVLQQLLKQSGELAEAQR
PQRLATAQQLAETALQQEIDRLQALAQINGQVRLEELTHLQQQRQRLEQLLTLATLQLDS
VRVLVVVD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggagtttacccccggccaacgctggatttgtgataccgaactgcaactcggg
ctaggcacggtggtggagtgtgagccgcgccgggtcacccttcgctttgatagttgtgat
gagactcgtagctacgctcgggataactcccccctgacccgcattatttttagtccgggc
gatagtattaaaaccacaaccggagagcagctacaggtcgatgaggtgatgcagcttcac
ggcctagtgatctacagcgccatgagcctcgatggtacgggggtgaatgtgctggagagc
gaccttgatcaccgcctacagctcaatcgccccgccgatcggctctttagcggtcaactc
gataatcagaagtgggtctcgctgcgctatcagagctggcagcagctacagcagctacgc
cgctcacccctctgggggctatctggtgtccgcaccgccctcattccgcatcagctctat
atcgcctatgaggtcggcagacgctatcagccacgagtgctacttgccgatgaggtcggt
ctaggcaaaaccattgaagccggcctgattatccaccaaaaatatctgtcgggtcaggcc
tcacggatcctaattgtcgtcccagagccgttactgcaccaatggctggtggagatggtg
cgccgctttaacctcaacttgactctgctcgatgaggagcgctgccaacagctcgatagc
gagggcgacaacccgtttttgagtcagcagttagttctcagcggccaatcctttttaagc
cactctgttgagcggcgccagcaggcgcttcaggcgcagtgggatctcctcgtggtcgat
gaggcgcaccatctacagtggagtgaagatgaggtaagtgatgactacctagcgattgaa
gagctagctcgaacgatccctgcggtactgctgctaacggcaaccccagagcagttcggt
cgggagagccacttctctcgcctgcggctactcgatcccgaccgcttctgtagctttagt
gactttatcgaacaggagcagagctatgccccaattgccgatgccgttgaacagctactc
actcaagcgccgctaacggctgaattagagcagcttattcgcaacaccggtattgaggga
gataacctcaccgccctacaacagctccagagcgaagagagttcagtacagcagcaggcg
cgaacagagcttatcgaccatctactcgatcgccacggcaccggacgcattctgtttcga
aacagccgtgaacgcattagcggctttccagagcgacagctagtcgcccacccgctgccg
ctgccggagcagtaccgtcaaccgctagatgactatctctgcgcccttatccccgatgag
ctaacccccgacagcgcgcagttccacccactgctctatccagagcagctatggcaacac
gatagcgaacagagcgatggctggactcgcttcgatccccgcattagctggctcatcgaa
cagctacagcaacagcggcaagagaagattgtagcgataaccgccaccgcccagagcgca
atcgacatcgcccacgccctgcgccacagagccaacctcaccaccgcgctattccatgag
cagatgacgctgttagagcgcgaccgtgctgccgcttggtttgctgatcgggagcagggg
tgccagctactcatctgctccgagatcggcagtgaggggcgcaactttcagtttgcccac
cagttggtactgtttgatctgccactcaatcccgatctactagagcagcgtatcggccgg
ctcgatagaatcggccagacccgtccggtgactatccacctcccctatctggaggggagc
ctgcaacagctactctaccactggtaccatcaggggctaaacgcctttgaacagaccgcc
actaccgcgcagagcttacagcagcgcttctggccgcagctacgacagagcatcatcacc
ctacacctcgatgagagcctactgcaacagctacaacaggccgatgcaacactgagacag
cagctaaggcaggggcgtaaccgactgttagagtttaactcctgccgcccccacatcgcc
aatcgactggtcgccgacgcagagcagctccagcaggatagaccgttaactcactggcta
gatcagctatttcacctaatcggcgtcgatgccgaaccccacagcgcctttagcactatt
cttcgcccgaccgagcagtttctgggcgattttatgcccgatctaactagcgatggcctc
accatgaccacccaccgtgcgacggcgctagctaacgagtcgctccacttctttagctgg
gagcacccgatggtacaagaggcactagagagcctattaagcagtgaacgaggcaacgcc
tcactcgccaccttcaaagagccccgttttgaaccgggcaccctgctgctagagtgctgg
taccgcctagaaccggccggccaccacgccggagagctgagtcgctacctcccgccacaa
ctactgcgtcaagtgattgacgataaccttcaagagtggagcagttcactcccattcgag
gagctacaaccgctactacaaccggtaaaacgagatatcgcccgtcaggtaatagagcgc
tcccgcccagtactacaacagctcttaaagcagagcggagagctagctgaggcgcaacga
ccacaacgactcgccaccgcacaacagctagccgaaacagcgctacagcaggagatagat
cggctacaagctctggcgcaaatcaatggccaagttcgtttagaggagctaacccaccta
cagcagcagcgccagcgcttagagcagctactcaccctcgccaccttgcaactcgatagc
gttcgcgtgctcgtggtggttgattaa
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