KEGG   Ectothiorhodospiraceae bacterium BW-2: D5085_07815
Entry
D5085_07815       CDS       T11052                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
ebx  Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:ebx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ebx02048]
    D5085_07815 (cas8c)
Prokaryotic defense system [BR:ebx02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    D5085_07815 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QEP43029
LinkDB
Position
1625164..1627170
AA seq 668 aa
MSWMAKLYDTYDAAMQLDLDGDQALMPISHSIQNAHIHIVLDGDGKFIRAEVLDKLQIML
PATEASAGRTSGEAPHALADKLQYVAADYSEFGGTKKAYFSSYHDQLSAWCNSIYVHTKA
QAVLSYIEQERVIADLVAQQVIHLDDNGHLLNCWEHEEEIPALFKILPKQKGETDQGAAL
VCWSVELSGDRQPHTWLDETLQQSWVDYQASESSDAGFCFITGENAPLATSHPAKLRHSG
DSAKLISANDSSGFTYRGRFTTPQQAASVGFGATQKAHNALRWLIKRQGFRNGDQVWVSW
AVSGQPIPEPAVSSWDWNLNLDALDNTTDHATESVSNDNEPTLQHSRNLGAQFAKQLNRY
LAGYRAKLKPTEEVVVMGLDSATQGRMSLIYYRELLSGEFLDRVEQWHRQFAWYQRHSEE
LPTEGKKKPKTRTIWPIASLAPRKIAETIYGSRLDDALKKSVIERLMPCIIDQRPLPEDL
LRLAVKRVSNRVGYPTDEWWRWEQDLGVACALYRGYRARHPQMNQQKEYSMALEEENHSR
DYLYGRLLAIAERIEEVALSVGGENRTTMAARLMQRFADRPYTTWRTLELSLQPYMQRLQ
VSRTGFLVNRKRELDQILAQFIPADFISDKALSGEFLLGYHCQRMAQKPKLTDDSSEHAE
SIELSNQE
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgagttggatggcgaaactttatgatacctatgacgctgccatgcagctcgatttggat
ggcgatcaggcgttgatgcctattagccactccatacagaatgcccatattcatattgtg
ttagatggtgacgggaaatttatccgtgcagaagtactcgataagttgcagattatgtta
cccgctaccgaagcttcagcgggtcgaaccagtggtgaagcccctcatgcactggccgat
aaactgcaatatgtagctgctgattacagtgaatttggtggaactaaaaaagcttatttt
tctagctatcatgaccagttatcagcatggtgtaactcaatctacgtccatactaaagca
caagcggttttaagctatatcgaacaggagcgggtaatagccgatttagtggcgcaacag
gtaattcatctggatgataacggtcatttactaaactgctgggagcatgaggaggagatt
cctgctctgtttaaaatattacctaaacagaaaggcgaaaccgatcaaggtgcagcactg
gtctgttggagtgttgaactctccggtgatcggcagcctcatacatggctcgatgagact
ctgcaacagagctgggtcgattatcaggcgagtgaaagttctgatgccgggttctgtttt
attaccggagagaatgcaccgctggcaacttcgcaccctgctaaactgcgccattccggc
gatagcgcaaagttaatttcagccaatgatagcagcggttttacctatcgtggtcgtttt
actactccgcagcaggctgcttcggttggttttggtgctacgcaaaaagcccacaatgcc
ctgcgctggctaatcaaacggcagggatttcgtaacggcgatcaggtttgggtcagttgg
gcggtatcgggtcaaccgatcccggagccggcagtcagcagttgggattggaatctaaat
cttgatgcgctggataatacaaccgatcatgcaacggaatcggttagcaatgacaacgaa
cccacgctacaacacagtcgtaatttaggcgcacagtttgccaaacagttgaaccgttat
ctggcagggtatcgtgccaaactgaagccgacggaggaggtcgtggtaatggggcttgac
tcggctacgcagggacgaatgagtctaatctactaccgcgaactactgtcgggggagttc
ttagatcgggttgagcagtggcaccgccagtttgcttggtatcagcgccatagcgaagag
ctacccaccgagggtaaaaagaagccgaaaacgcgcactatctggccgattgcctcactc
gcaccacgaaaaattgctgaaacgatttacggcagtcgtctcgatgatgcgctgaaaaag
agcgtgattgagcggctgatgccctgcattattgatcaacgcccgctacctgaagattta
ctgcgattagcggtaaagcgggtcagtaatcgggtcggttatcccactgacgagtggtgg
cgttgggaacaggatttaggcgtagcctgcgccctctatcgcggctatcgtgcccgtcat
cctcaaatgaatcaacaaaaggagtactctatggctttagaagaagagaaccacagtcgt
gactatctctacggtcgtctgctggcgattgccgaacgcattgaggaggtcgcgctcagt
gttggcggtgagaatcgtactaccatggcggcgcgactgatgcagcgctttgccgatcgt
ccctataccacctggcgcacgctggagctgtcgttacagccctatatgcagcggctccaa
gtatcccgaaccggctttttagtcaatcgtaaacgagagctggatcagattttggcacaa
tttatcccggccgactttatcagcgataaggcactcagtggtgagtttctgctcggctac
cattgtcagcgcatggcgcaaaaacccaaattaacggacgatagcagtgaacatgctgaa
tccatcgaactatcgaatcaggagtaa

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