Ectothiorhodospiraceae bacterium BW-2: D5085_09025
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Entry
D5085_09025 CDS
T11052
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx00630
Glyoxylate and dicarboxylate metabolism
ebx00710
Carbon fixation by Calvin cycle
ebx01100
Metabolic pathways
ebx01110
Biosynthesis of secondary metabolites
ebx01120
Microbial metabolism in diverse environments
ebx01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D5085_09025
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
D5085_09025
Enzymes [BR:
ebx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
D5085_09025
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Paralog
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QEP43246
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All DBs
Position
complement(1902311..1903726)
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AA seq
471 aa
AA seq
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MAKQTYDAGVKEYRDMYWTPDYVPLDTDLLACFKCTGQPGVPREEVAAAVAAESSTGTWS
TVWSELLTDMEYYKGRAYRIEDVPGDSESFYAFIAYPIDLFEEGSVVNVLTSLVGNVFGF
KALRHLRLEDIRFPIAYIKTCGGPPAGIQLERDRLNKYGRPMLGATIKPKLGLSAKNYGR
AVYECLRGGLDMTKDDENVNSQPFMRWRDRFEFVGEAIQKAQQETGERKGHYLNVTASTP
EEMYKRAEFAKEVGSPIIMHDFLTGGFTANTGLANWCRENGMLLHIHRAMHAVIDRHPKH
GIHFRVLAKCLRLSGGDHLHTGTVVGKLEGDRQSTLGFVDQLRESYVPEDRSRGVFFDQD
WGSLPGVMAVASGGIHVWHMPALVTIFGDDSMLQFGGGTQGHPWGNAAGAAANRVALEAS
IKARNEGREIEKEARDILSEAARHSPELAIAMETWKEIKFEFDTVDKLDLS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaacttacgatgcaggcgttaaagagtaccgtgatatgtactggacgccg
gactatgtccccttagataccgatctactcgcgtgctttaagtgcaccgggcagcccggc
gttccccgcgaagaggtcgcggccgccgtcgctgccgagtcttcgaccggtacttggagt
acggtatggtctgaactattgaccgatatggagtactacaaaggccgcgcctatcgtatc
gaagatgttccgggcgattcagagtccttctacgcctttatcgcctaccctatcgatcta
ttcgaagagggctcagtcgttaatgtgctgacctcactcgtcggcaatgtctttggcttt
aaagcgctgcgccatctgcggctggaagatattcgcttcccaatcgcctacattaagacc
tgcggtggccctcctgccggtattcagctagaacgagaccgtctgaataaatatggtcgt
ccaatgctaggcgcgaccattaagcctaagctcggtctctcggctaaaaactatggccgt
gccgtctatgagtgtctgcgcggcggtctggatatgaccaaagatgatgagaatgtcaac
tcgcagccctttatgcgctggcgcgaccggtttgagttcgtcggcgaggcgattcagaag
gcgcagcaggagaccggcgagcgcaaggggcactacctcaatgtgaccgcctcaacccct
gaagagatgtataagcgggccgagtttgctaaagaggttggctcccctatcattatgcac
gactttttgactggcggttttaccgccaataccggtctagctaactggtgccgtgaaaac
ggtatgctgctccacattcaccgcgcgatgcacgccgttatcgaccgccatccgaagcat
ggtatccactttcgcgtcctcgctaagtgtctgcgcctctctgggggtgaccacctccac
accggcaccgtcgtcggtaaacttgagggcgaccgtcaatcgacactcggctttgtcgat
cagctacgggaatcgtatgtccccgaagatcgctctcgcggggtcttcttcgatcaagat
tggggttcactgcccggcgtgatggctgtcgcctcaggcggtatccatgtctggcacatg
ccggcgctggtgaccatcttcggtgatgactccatgctacagttcggcggcggtactcaa
gggcatccatggggtaatgcagctggggcggcggcgaaccgtgtcgcgctagaggcgagc
atcaaggcgcgtaacgaagggcgcgaaatcgagaaagaggcacgagatattctctctgaa
gctgcacgccacagccctgaactcgccattgctatggagacttggaaagagattaagttc
gagtttgatacggttgacaagctggatctctcctaa
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