Ectothiorhodospiraceae bacterium BW-2: D5085_10280
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Entry
D5085_10280 CDS
T11052
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D5085_10280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ebx02000
]
D5085_10280
Transporters [BR:
ebx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
D5085_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Bmp
Motif
Other DBs
NCBI-ProteinID:
QEP43479
LinkDB
All DBs
Position
2154432..2155472
Genome browser
AA seq
346 aa
AA seq
DB search
MRIMCWVAALAVSISIVTATAAAADKLVIYNWTEYIPDGMVERFSQESGIEVEYATFDSN
ETMYAKVKLLNGAGYDLIVPSSYYISKMAREGLLQPIDKRQLTELKNLDPALLDKPYDPG
NRYSIPYLWGSTGIGVDSSRVDPATVTRWADLWKPEFKGQVLLTDDVREVFQVALSTQGY
SANTTDPDEIKAAYELLQQLMPSVRLFNSDAPRIPYLAGDVSVGMLWNGEAWMAREESET
LKYIYPKEGAIFWVDSFAIPVNAANPTAAHRFIDYILRPENAKEVIEYTGFAAPNLPAMR
LLDSAVLASPTIFPDTATIAKGEFQKDIGDETLQLYNRYWQKLKSH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatgtgttgggtagcggcgctggccgtctcgatttcgattgtcacggcaaca
gctgccgcagcggataagctggtgatctataactggactgaatatatccccgatgggatg
gtggaacgatttagtcaggagagtggcattgaggtagagtatgctaccttcgatagcaat
gagacgatgtatgccaaagtcaaactactcaatggcgcaggttacgatcttatcgtcccc
tcaagctactatatctctaaaatggcgcgagaggggctactgcaaccgatcgataaacgt
cagttaaccgagctaaaaaatctcgatccggcgctactggataaaccctacgaccccggt
aaccgctatagtatcccctatctgtggggcagcaccggtattggtgtcgatagcagtcgg
gtcgatccggcgacagtgacccgctgggccgatctctggaaacccgaatttaaaggacaa
gttctcctaaccgatgatgtgcgtgaagtcttccaggtggcgttaagtacccaaggctac
tccgccaacaccaccgatccggatgagattaaagcggcctatgagctgctacagcagctc
atgccgtcggtacggctatttaactccgatgcaccacgcatcccctatctagccggagat
gttagcgtcggtatgctctggaatggcgaggcgtggatggccagagaggagagtgaaacc
ctcaaatatatctaccctaaagagggggcgatcttttgggttgatagctttgcgatcccc
gttaatgccgccaatcccaccgccgcacaccgctttatcgactatattttgcgcccagaa
aatgccaaagaggtgatcgagtacaccggttttgccgcccctaatctccccgccatgcgg
ctactagatagcgccgtattggcgagcccgaccatctttcccgataccgcaacgattgct
aaaggggagttccaaaaagatatcggcgatgagaccctccagctatacaaccgctattgg
cagaaacttaagagccattag
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