Ectothiorhodospiraceae bacterium BW-2: D5085_11220
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Entry
D5085_11220 CDS
T11052
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebx03016
]
D5085_11220 (truB)
Enzymes [BR:
ebx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D5085_11220 (truB)
Transfer RNA biogenesis [BR:
ebx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D5085_11220 (truB)
Prokaryotic type
D5085_11220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QEP43642
LinkDB
All DBs
Position
2312441..2313349
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AA seq
302 aa
AA seq
DB search
MGRRRPKGRPVNGILLLNKPIGATSNHALQQVKRLYQAAKAGHTGNLDPLASGMLPICFG
EATKYSAFLLDATKRYVGTCQLGVTTTTADAEGEVIESCDVPPLSLAQIESVLEQFRGEI
EQLPPMYSALKHKGQPLYKLAREGKEIERQPRRVTIYELTLQQQRQDALLLEVFCSKGTY
IRTLVEDIGKQLGCGAHLSQLERTAVGPFQASEMVTMAQLESVQSPAEREQWLVGLDRAV
ADFTPLSVTPTGEFYLQQGQPIQIAAAPASGWVRLYSGDGRFIGVGVVLDDGRIGPKRII
QH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaggcgacctaaagggcggccagttaacggtattttattactgaataagccg
attggagctacctctaaccatgcgttgcagcaggtaaaacggctctatcaggcggctaaa
gcggggcacaccggtaaccttgatccgctcgcgagtgggatgttaccgatctgctttggc
gaggcgactaaatattcagcctttttactcgatgcgactaagcgctatgtcggcacctgt
caactaggggtaacgacaacgaccgctgatgccgaaggggaggtgatcgagagctgtgat
gtccccccattgagtttggcgcagatagagtcggtactagagcagtttcggggcgagatt
gagcagctacccccgatgtattcggccttaaaacataaagggcagcccctctataagctc
gcacgggagggcaaagagattgagcggcagccacgacgagtgactatctatgagctgacg
ctccagcagcagcggcaagatgcgctgttgttagaggtcttctgctctaagggaacctat
attcgcaccttggtggaggatattggcaaacagctcggttgcggtgcccacctgtcacag
ctagaacgaactgcggtagggccatttcaggcctctgagatggtgaccatggcgcagtta
gagtcggtgcagagtccggcagagagggagcagtggctagtcgggttggatcgggcggtc
gccgattttaccccacttagcgtaacgcctaccggcgagttctacctgcagcaggggcag
ccgattcaaattgccgcagcgccggcaagcggatgggtgcggctctatagcggcgatggg
cgttttattggtgtgggtgtcgtgctcgacgatggtcgtatcgggccgaaacggattatt
cagcactag
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