Ectothiorhodospiraceae bacterium BW-2: D5085_11340
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Entry
D5085_11340 CDS
T11052
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03030
DNA replication
ebx03430
Mismatch repair
ebx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5085_11340
03430 Mismatch repair
D5085_11340
03440 Homologous recombination
D5085_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebx03032
]
D5085_11340
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_11340
Enzymes [BR:
ebx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5085_11340
DNA replication proteins [BR:
ebx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5085_11340
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5085_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_18
AAA_5
AAA_22
AAA_14
SKI
AAA_30
AAA_2
AAA_16
AAA_19
nSTAND3
AAA_lid_RFC1
AAA_7
AAA_28
Rad17
TsaE
PIF1
AAA_assoc_2
Mg_chelatase
RNA_helicase
Herpes_Helicase
DUF3322
Motif
Other DBs
NCBI-ProteinID:
QEP45141
LinkDB
All DBs
Position
2334990..2336606
Genome browser
AA seq
538 aa
AA seq
DB search
MSYQVLARRWRPRTFAQLVGQHHVVKPLLHGLQSGRLHHAFLFTGTRGVGKTTIARILAK
ALNCSLPQQGEPCGECGSCVAIDEGRFVDLLEVDAASRTKVDDTRELLDNIQYAPVHGRY
KIYLIDEVHMLSRHSFNALLKTLEEPPDHIKFLLATTDPQKLPPTILSRCLQFGLQALTP
EQIRSQFETILHSEQIEADAEALWELALAADGSLRDGLSLLDQAISYGGGRVVLDEVRQM
LGTVGRQQLIVMLNALAEDNPAQLLQQVEQAARQGRDLRRLLNDVNRLLQQLALLQQIPD
YPGIEQRQALTALSQQLSREDVQLYYQIGIHGWRDLAYSPDVRTGVEMTLLRMLAFRPRQ
SHRQEERRGGGHRSDDSVEPHPAPLSPPSAASPLPAFSVVAENDSQWREWSRQLRVKPMT
QQLAQHCQLVACDGGRLQLQTQSAVGSLLDREEELRQGLQRLLNRPVELSLRVISADEGC
APLETPRVIEQREWAEKQTQAEAAMAADAVVERLIELFGAQLIPSSIKPLEGGDESAR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcccgtcgttggcgcccgcgcacctttgcccagctagtggga
cagcaccatgtggttaaaccgctgctgcacggcctgcagtcgggacgactccaccacgcc
tttctgtttaccggtacccgaggggtgggtaagaccacaatcgcgcgaattttagccaag
gcgctaaactgtagcctgccgcagcagggtgagccgtgtggcgagtgtggtagctgtgtg
gcgatcgatgaggggcgctttgtcgatctgttagaggtcgatgccgcctcgcgcactaag
gtcgatgatacccgtgagctacttgataatattcagtatgcaccggtgcacggtcgttat
aagatctatctcattgatgaagtgcacatgttatcgcgccatagcttcaatgcgctgtta
aagacgctggaggagccgccagaccatattaaatttctattagcgaccaccgatcctcaa
aagctaccccctacgattctatcgcgctgcctgcagtttgggctgcaggcgttaacgcca
gagcagattcgctcccaatttgagactattttgcatagtgagcagatcgaagctgacgct
gaggcgctatgggagctggctttggcggctgatggtagtctgcgtgatggtttaagtctg
ttggatcaggcgattagttatggtggcggtcgcgtcgttctcgatgaggtgcgacagatg
ctcggtaccgtaggacggcagcagttaattgtgatgctgaacgcgctggctgaggataat
ccggcacagctactacagcaggtcgagcaggcggcgaggcaggggcgcgatctgcgtcgg
ctgcttaacgatgtcaatcgcctcctgcagcagttagcgctgttgcagcagattcctgac
tatccggggatcgagcagcgccaagcgctgacagcgctgtcacaacagctaagtcgtgaa
gatgtgcagctctactaccagatcggaatccacggctggcgcgatctcgcctacagcccc
gatgtgcgtaccggagtagagatgacgctgctgcgaatgctcgcctttcgtccgcgtcaa
agccatcgccaagaggagaggcgagggggagggcaccgcagtgacgactccgtcgagccc
catcctgcccccctctctcccccgtcagccgcctcacctctgccggcgttctctgtggtt
gcagaaaacgatagccagtggcgcgagtggagtcggcagttgcgggttaaaccgatgacg
cagcagctagcgcaacactgtcaattagtggcctgtgacgggggacggttacagcttcag
acccagtcggctgtcggttcactgctcgatagggaggaggagctgcgtcaagggctacag
cggttgttaaatcgacccgtcgagctatcgttgcgggttataagtgcagacgagggttgt
gccccgttagagacgccgagagtgatagagcagcgggagtgggccgaaaagcagacccag
gcagaggcggctatggctgccgatgcggtcgtggagcgcttgattgagctgtttggggcg
cagcttatccccagttcgatcaagccgttggaggggggcgatgagtcagcgcgatag
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