Ectothiorhodospiraceae bacterium BW-2: D5085_11555
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Entry
D5085_11555 CDS
T11052
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D5085_11555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ebx02022
]
D5085_11555
02035 Bacterial motility proteins [BR:
ebx02035
]
D5085_11555
Two-component system [BR:
ebx02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D5085_11555
Bacterial motility proteins [BR:
ebx02035
]
Pilus system
Twitching motility proteins
D5085_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
MCM
AAA
AAA_22
HTH_28
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QEP43696
LinkDB
All DBs
Position
2382871..2384247
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AA seq
458 aa
AA seq
DB search
MSFRPTALIVDDEPDILELLALTLSRMGVESRAAASLEQAFRMLQQQPFHLCLTDMRLPD
GDGLELVRYISSELPQLPVAVITAHGNMDCAIEALKAGAFDFVNKPVELKTLKALIESAL
KLSRGDSEPSADRASEEASFLGEAAVVIELRQTVRKLARSQAPIYIKGESGTGKELIARM
IHRLSPRAERPFIAVNCGAIPAELIESELFGHVKGSFTGATQNKQGLFVAADGGTLFLDE
IAELPLEMQVKLLRVIQERRVRPVGSEREQAIDIRILSATHQHLAARVREGLFREDLYFR
INVIELELPSLRQRREDIPLLVDHIVQRICRRLQQLPIKLSPQALETLQHYPFPGNVREL
ENILERALTLSDGSMVGVDDLRLQLPEPEELQRERLDEGARVLLWAEEVGLDACMEQIER
SVLQQALQQCRFNKTAAAKRLGISFRSLRYRLQRLGIE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaggccaacggcgctcattgtcgatgatgagcccgatatactagagctatta
gcgctgactctgtcgcgcatgggagtggagagtcgtgctgccgcctcactagagcaggcg
tttcgtatgttacaacagcagccgtttcacctctgtttgaccgatatgcgtctgcccgat
ggcgatggtctggagctagtgcgctatattagcagcgaactaccacagctaccggtagcg
gtgattaccgctcacggcaatatggattgcgcgattgaggcgctaaaggcgggggcgttc
gattttgttaataaaccggtcgaactgaaaacactgaaggcactcatcgagagtgcactg
aagctatcacgcggcgatagtgaaccatcagcagaccgggcgagtgaggaggctagtttt
ttaggcgaggccgctgtggttatcgagctgcggcagacagtgcgtaaattagcacgcagc
caggcacccatctacattaaaggcgagtcgggaaccggcaaagagctcatcgcccgcatg
attcaccgcttaagtccccgagcagagcgaccctttatcgccgttaactgtggcgcgatt
ccggctgaactgattgagagcgaactgtttggccatgtgaaggggagctttaccggcgct
actcagaataaacaggggctatttgtagcggccgatggcgggacgctgtttttagacgaa
atcgccgaactgccgcttgagatgcaggttaaattgctgcgggtgattcaggagcggcga
gtgcgtccggtcggctcagagcgagagcaggcgatcgatattcgtattttgagtgctacc
caccaacatttagctgcccgagtacgggaggggctgtttcgggaagatctctacttccga
attaatgtgattgagctggagctaccgagtctgcgccaacggcgtgaggatattccccta
ctagttgaccatattgtgcagaggatctgtcggcgtctgcagcagctaccgatcaaactg
agcccgcaggcgctagagacgctgcaacactacccctttccgggcaatgttcgagagttg
gagaatatactagagcgagccttgaccttgagtgatggctcaatggtgggggtggacgat
ctgcgtctgcagctccccgaaccggaagagctgcagcgagagagacttgatgagggggct
agagtgctgctgtgggcagaggaggtagggctcgatgcctgcatggaacagatagagcgc
tctgtgttacagcaggcgctacaacagtgccgttttaataaaacggctgccgcaaagagg
cttggaatcagttttcgttcgctgcgctatcgtctgcagcgactggggattgagtag
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