Ectothiorhodospiraceae bacterium BW-2: D5085_12225
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Entry
D5085_12225 CDS
T11052
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03030
DNA replication
ebx03430
Mismatch repair
ebx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5085_12225
03430 Mismatch repair
D5085_12225
03440 Homologous recombination
D5085_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebx03032
]
D5085_12225
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_12225
Enzymes [BR:
ebx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5085_12225
DNA replication proteins [BR:
ebx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5085_12225
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5085_12225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QEP43824
LinkDB
All DBs
Position
complement(2539384..2540094)
Genome browser
AA seq
236 aa
AA seq
DB search
MQWPRFLLSDNHYRLQRLRHCPTGTALHHFLSTPFPDPNTPSRQVPIVAIDLETTGLKAK
EDDILSIGLLHLNGEIIELQQSLHLLVRPAQAIPEPSAIIHGITDTDAAAGLPLEEALNQ
ILPLIAGRVMLAHHAAMELNFIGRAIEIIYGCRWIVPVIDTEWLARRQMQRRNLPIRRGD
LRLATLRQHAQLPLYRAHNALSDALATAELFLVQREQLTGGKDLPLKRLLYPRAGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggccccgttttctactcagtgacaaccactaccgcctacaacgactacgccac
tgcccgacaggcaccgccctgcaccacttcctctccaccccctttcccgatccgaacaca
ccgagccgtcaggtaccgatagtcgctatcgatctagagaccaccggcctcaaggcgaaa
gaggatgatatcctctccatcggcctgctccatctcaatggcgagatcatcgaactacaa
cagagtctccacctcttagtccgtccggcgcaagcgattcccgaaccgagtgcgattatc
cacggaattaccgataccgatgccgccgccggcctccccctagaagaggcactcaaccag
atcctccccctcatcgctggacgggtgatgctagcccaccacgccgcgatggagcttaac
tttatcggccgagctatcgaaatcatttacggctgccgctggatagtaccggtcatcgat
accgaatggctcgcccgccgccagatgcagcggcgcaacctgccgataaggcgcggtgat
ctgcgcctagctacactgcgtcaacacgcccaactgccactctatagagcccacaacgca
ctcagtgatgcgttagccaccgcagagctctttttagtgcaacgagagcagctaaccggt
ggcaaggatctaccgctcaaacggctgctctaccctcgcgcggggttgtga
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