Ectothiorhodospiraceae bacterium BW-2: D5085_12915
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Entry
D5085_12915 CDS
T11052
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03420
Nucleotide excision repair
ebx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5085_12915
03430 Mismatch repair
D5085_12915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_12915
Enzymes [BR:
ebx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5085_12915
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5085_12915
MMR (mismatch excision repair)
Other MMR factors
D5085_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PhoH
ResIII
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEP43937
UniProt:
A0A5C2HLM4
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All DBs
Position
2685165..2687216
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AA seq
683 aa
AA seq
DB search
MQFTRQQAEVIHHGQGHAKVVAVAGSGKTATLLGHLCHTLKQGVSPHHILVVMFNVDARN
AFLQRLQQRLGPMALLPDVRTFNSMGERLTRWLERSGSLPQRRLETDSYLLERIAREALI
AHYGNKSSEVWDKEVMDAFLNYILLAKSTLKSAAKVCESYQFDEGFAVAFDHFESLRQQQ
QIRTYTDQIWEPVKLIMADEALQQQVANRMEVVLVDEFQDVNEIQIALIRLIVGQRARLV
VVGDVDQCIYEWRGSRPRFLLREFQASYPDAKSYRLDTTFRYGHTLSLLANHAISHNQER
EPTFSLSPPESRDITLQLHPQQGDSAALIEIVQRWSESRPLEQMAVLYRFGAMAVVDTLN
LMAAGIPLRLRRIPSVFSFGVLNSLLAVLQLVTGRLLQKGQEEQLLQLLTQPAVTIDRRR
LQHQINLACREGNFEQLWPLVDEVRHPFAREKFLQRLLWLQQQSRVVNGAEQSAATLLRH
YLQQNDILAAMTKLATTATVAEERLTAVEQFIQFIAVRQLTVEAAVVLFQQLQQQLSQQS
QGLLLTTIHQSKGLEWPCLVLPQLKQGVFPRAQCNIEEERRLWYVAITRCQEQLHLIAPH
DPVLWQAFEQQQEVNSRDYIASRFIYESQPGLSVRVGEAIQRRQWQRLAEIGAVRGPEVV
NHYLRQVVDDPKPPQLVRARGSR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtttacccgtcaacaggccgaggtgatccaccacggccagggccatgcgaaggtg
gtggcggttgccggttccggtaagacggctaccctgttagggcacctttgtcacacgcta
aaacagggggtctcgccccaccatattttggtggtgatgtttaatgtcgatgcccgtaac
gccttcttgcagcggctacagcagcgattggggccgatggctcttctgcccgatgtgcgt
acttttaatagtatgggcgagcgtttgactcgttggttggagcgctctggctctctgccg
cagcggcggttggagaccgatagctatcttctggagcggatagcgcgtgaggcgttgata
gcccactacggcaataaaagcagcgaggtgtgggataaggaggtaatggacgcctttttg
aactatattctgctggctaaatcgacactaaaatcggcggctaaggtgtgtgagtcctat
cagtttgatgaggggtttgccgtcgcttttgatcacttcgagtcgctgcgccagcaacag
cagatccgcacctataccgatcagatttgggagccggtgaagctaatcatggccgatgag
gcgctacagcagcaggtggctaatcgcatggaggtggtattggtggatgagtttcaggat
gtgaatgagattcagattgccctgattcggctgattgtggggcagcgggcgcggctggtt
gtggtcggggatgtggatcagtgtatctatgagtggcgcggctctcggcctaggtttctg
ctgcgggagtttcaggcgagctatcctgacgcgaagagttatcgtctcgataccaccttt
cgttatggtcatacgctgtcgctgctagcgaaccatgccattagccataatcaagagcgg
gagccgaccttctccctctctccgcctgagagtcgtgatattacgctacagctccatccg
cagcagggcgattcggcagctcttatcgagattgtgcagcgctggagcgagagtcgtcct
ttagagcagatggcggtactctaccgttttggagcgatggcggtggtcgataccctcaat
ttgatggccgctgggatccccctacggctgcgacgaatcccctcggtcttctccttcggg
gtgctgaacagtctgttggcggtgttgcagttagtaaccggacggctactccagaaaggt
caggaggagcagctactgcagctactcacccagccggcggtgacgatagatcgtcgtcgg
ttgcagcatcagatcaatttggcgtgtcgtgagggcaattttgaacagctatggccccta
gttgacgaggtgcgccacccgtttgcgcgggagaagtttttgcagcggctgctctggctg
caacagcagagtcgagtggtgaatggcgcggagcagtcggcggcgacgctactacgacac
tatctgcagcagaacgatattctagctgccatgactaaactcgccaccacagcgacggtg
gccgaggagcgtttgaccgctgttgaacagtttattcagtttattgccgtgcgccagctc
actgttgaggctgcggtggtgctgtttcaacaactgcagcagcagctatcacaacagtca
caggggttgttgttaacgactattcaccaaagtaaggggctagagtggccctgtctggta
ctaccgcagctaaagcagggggtgtttccccgcgcacagtgcaatattgaggaggagcgg
cggctctggtatgtcgcgatcactcgctgtcaggagcagctccatctgattgcgccacac
gatccggtactgtggcaagcctttgagcagcagcaggaggtcaatagtcgcgactatatt
gctagtcggtttatttatgagtcgcaaccggggctctcggtgcgggtaggcgaggcaatt
cagcggcggcagtggcagcgtcttgccgagatcggggccgtaagggggccggaggtggtt
aaccactatctgcgtcaggtggtggacgatcctaaaccgccgcagttagtacgggctaga
ggttctcgttaa
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