Ectothiorhodospiraceae bacterium BW-2: D5085_13425
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Entry
D5085_13425 CDS
T11052
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03420
Nucleotide excision repair
ebx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5085_13425
03430 Mismatch repair
D5085_13425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_13425
Enzymes [BR:
ebx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5085_13425
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5085_13425
MMR (mismatch excision repair)
Other MMR factors
D5085_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
ResIII
AAA_12
DEAD
AAA_11
AflR
CH
Motif
Other DBs
NCBI-ProteinID:
QEP45166
UniProt:
A0A5C2HRP2
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All DBs
Position
2790998..2792902
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AA seq
634 aa
AA seq
DB search
MSLSPSQSQIVKAPLDRAIQILASAGSGKTRVLIERIRYILDNTKKDGVIALTFTNKAAE
EMSSRLVDCDPAEDRSWVATTHSVAQRILEKYGHTIGLPAELHIYDRDKDRMELFMQSLR
EDGIDIDEHLNISDSKDLKSRERNLQDYLNYFSRIKRELLTEQDVAEVFPINNIWKIFQD
YQNSLLNSGGIDYDDILVYAHKILLTHEWVAKIYRSQFKHICVDEAQDLNKAQYEFIKAF
CGDVIHSILMVGDPNQMIYGFNGSSKEYLCTNFVEDFSPQQYELKENYRSAKAIIRAANK
LKSNSQSETKYALEGDVNIAEFETEEDEADSISSTISQLLDLATHDEIEGTISLDKMVVI
ARNRFVFKPLENSLKERGIPYFLRKGEKQLEFSTKLGKALDYAVRIKLNHKDWVDGKKLC
QVLNISEPDKWTTATLEYLATQVSSVNHENNELLANLLFAINNLDIEAPKIPKLVRDFND
YLTSLVNNQNGISSDKIEEIKLSIEELKEFNGLWTKFQLKGLGHSLSAFRNALALGQLTD
STTDKGLTLSTVHTMKGLEKDIVFLIGMCEGVFPDYRARTLKEIDEERNNAFVAVTRAKR
WLCISYPKQRVMPWGDIRCQEKSRFIKEIERSVM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttatcgccaagccaatcccaaattgtaaaggctcctcttgatagagcaatacag
atacttgcctctgctggttctggcaagactcgtgtattaattgagcggatccgctatatt
ttggataacaccaagaaagacggagtaatagcattaacttttaccaataaagcggcggaa
gagatgagttcccgcttagttgactgcgatccagcagaagatagatcctgggttgctaca
actcactccgttgcacagcgtattttggagaaatatggtcataccattgggttaccggct
gaacttcatatatacgatagagacaaggatcgaatggaactctttatgcagtctttacgc
gaagatggtattgatatagatgagcacctaaatatctccgactcaaaagatctaaaaagc
agggaaagaaacctgcaagactatctgaattatttttcgagaataaaacgggagttgctt
acagaacaagatgttgccgaagtatttccaatcaataacatttggaaaatatttcaggac
taccaaaactctttattgaacagtggcggaatcgactatgatgatattttggtgtatgcc
cataaaatattattaacccatgaatgggttgctaaaatataccgttcacaatttaagcat
atctgtgtagatgaagctcaagacctaaacaaggctcaatatgaatttattaaggcgttt
tgtggtgatgttattcacagtattttgatggtaggcgaccctaatcaaatgatctatgga
tttaacggttcgtcgaaggagtatctttgtacgaattttgtagaagacttttcaccacaa
cagtatgaactaaaggaaaactatcgaagtgctaaagccattattcgtgccgcaaataag
cttaaatccaactcccaatctgagacaaaatatgctctggagggtgatgtaaatattgcc
gaatttgaaactgaggaagatgaagcagattcaatttcttcaactattagtcaactattg
gatttggcaactcatgacgagattgaaggcacaatatccctcgataaaatggtagtgatt
gcccgtaatcgattcgtatttaaaccactagaaaatagccttaaagaaagaggaattccc
tattttctaagaaaaggcgagaaacaactagagttttcaacaaaattgggtaaggcactt
gattatgccgtgcgtattaagttgaaccataaagattgggttgatggaaaaaaactgtgt
caagtgttgaatatttctgaacccgataagtggacaacagcgactttagaatacctcgca
actcaggtatcttcagtaaaccatgaaaataatgagctattggcaaaccttctttttgca
atcaataacttggatattgaagccccaaagatccctaaattagtgagggattttaatgat
tatttgacttcactggttaataaccaaaatggtatctccagtgacaaaattgaagagatt
aagttaagtattgaggaacttaaggaatttaatggtctgtggactaagttccagctaaaa
gggttgggtcattcattgagtgcatttaggaatgcattggcattaggccagcttacagac
agtacgactgataaggggctgaccctaagcacggtgcacacaatgaaaggactggagaag
gatatcgtattcttaattggcatgtgtgaaggcgttttccctgattatcgagccagaacc
ctcaaagaaatcgatgaagaacggaacaatgcttttgttgctgtaacaagggctaagcgc
tggttgtgtatctcttatccaaagcagagagtgatgccttggggagatataagatgtcag
gaaaaatctcgttttataaaggaaattgagcggtcagtgatgtag
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