Ectothiorhodospiraceae bacterium BW-2: D5085_14735
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Entry
D5085_14735 CDS
T11052
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebx03019
]
D5085_14735 (rapZ)
Messenger RNA biogenesis [BR:
ebx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D5085_14735 (rapZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_28
nSTAND_NTPase5
SKI
C5-epim_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEP44266
LinkDB
All DBs
Position
complement(3097745..3098605)
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AA seq
286 aa
AA seq
DB search
MELIVISGTSGSGKSIALKALEDHDFYCIDNLPVALIEPFIAHCITSGHGTSRPCRAAIG
IDIRTLHHDTQSFRSAFHQLQQDYSLILIFLDANDAVLIKRYSESRRRHPLSDDNTSLEE
AISQERLLLQPLLQMAHHQFDTSSTSVYQLRHMVIKAAGQVEGKQMAIMFGSFGFKFGIP
QEADFVFDVRCLINPHWEAKLRPLTGRDRPVSDYLQQNSDVEQMFNDICHFIQQWIPRFA
QDRRSYLTIAIGCTGGQHRSVYMAERLADHFRQGDYPVQLHHRELE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaacttattgttattagtggcacctccggttcaggtaaatcgattgcacttaaggca
ctagaagatcacgatttctactgtatcgataatcttcccgttgccctaattgagcccttt
attgcccactgcattaccagtggtcacggcaccagccgaccctgtcgcgccgctatcggc
atcgatattcgtaccctgcaccacgatacccaaagttttcgtagcgcctttcatcagcta
cagcaagactactcgctcatcctcatctttctcgacgcgaatgatgcggtgctcataaaa
cgctacagcgagtctcgtcgtcgccaccccctctcagatgacaacacctcgctagaggag
gcgattagtcaggaacggctactcctccagccgctgctacagatggctcaccaccagttt
gacacctcctcaaccagcgtctatcaactacggcacatggtcattaaagcagcggggcag
gtagagggtaaacagatggcgatcatgttcggctcattcggtttcaaattcggcatccca
caggaggccgacttcgtattcgatgtccgctgcctgattaatccccactgggaggccaaa
ctgcgtcccctcaccggtcgcgatcgtcccgttagcgactatctacagcaaaatagcgat
gtcgagcagatgtttaacgatatctgccactttattcaacagtggatcccccgttttgcc
caagatcggcgcagctatttgaccattgccatcggctgcaccgggggtcagcaccgttcg
gtctatatggccgaacggttagccgaccactttcgccaaggggactatccggtacaacta
caccatcgggagctagaatga
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