Ectothiorhodospiraceae bacterium BW-2: D5085_15670
Help
Entry
D5085_15670 CDS
T11052
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03410
Base excision repair
ebx03430
Mismatch repair
ebx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D5085_15670
03430 Mismatch repair
D5085_15670
03440 Homologous recombination
D5085_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_15670
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D5085_15670
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D5085_15670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D5085_15670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
HEAT_ATR
Carb_kinase
Motif
Other DBs
NCBI-ProteinID:
QEP44439
LinkDB
All DBs
Position
3317681..3319477
Genome browser
AA seq
598 aa
AA seq
DB search
MTPLPLQIHNGRWLSHLRRRAVTEEELAAFTSGEVKLSPTAARIAASRTRGSAAVSTLFA
TAADLTHPDQLPDALLAAQRMVRALADREIIALVSDSDTDGLTSHALSRLILEQQFNTAP
AQLISEIGHKINDGYGLSDNLCQRLLQRTPRPTLVITMDCGSSDEARIAQLKEAGIDVIV
TDHHELPQASPPPSALATLSPIRADSGYGDPTIAGCMVAWLFWCQVRVALIESNRLPASA
PKLSRYLDFVALGTVADCVTLAHSHNNRAVVKLGLEIINRSNHPAWQIVRQEAGSHGTIN
ASALAFDVAPRINGASRMATPWPALKFLLTPNHSEAEQLWLEISGYNQQRKQVQQQMVQQ
AMAQIRLIDFRYQYGLALYLAEGHPGVQGIVASRLLERSGMPVACMTPHRHDEQLLSGSM
RSLDTVHARKVLQHCFDTIPDCGPGYGGHAAAGGFTLYRDKLPQFIHHFCAAIEQQHPQP
FEPVIYSDGELATELLSLDLVTELERLEPFGRQFPAAAFEAIFTIERLFHMGKNGEHLRL
ELTACHHRFNAVWFFALDPLGNTPVVQGQSYRFLFTPIRNDYRGMEALQLRVTGIITV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccactgccgctgcagatccacaatggccgctggctaagccacctgaggcggcgt
gcggttaccgaagaggagcttgccgcctttaccagcggcgaggtaaaactctcgcccacc
gctgcccgaatcgccgctagccgcacgcggggcagcgctgccgtttcgacgctatttgcc
accgcagccgatctaacccatcccgatcagctccccgatgccctactagccgcccagcgc
atggttagggcgttagctgatcgcgaaatcatcgccttagtctccgactccgacaccgat
ggtctcaccagtcacgccctgtcgcgactgatcctagagcagcagttcaacacagcgcca
gcacagctaatctcagagatcggccataaaatcaatgatggttacggattgtcagataac
ctctgccagcgactactacagcgcactccccgacccactttagtcatcaccatggattgc
ggttcaagcgatgaggctcgcattgcgcagttaaaagaggccggtatcgatgtcatcgtc
accgaccaccatgaactaccgcaagcgagcccccccccttccgccttggccaccctctcc
ccaattagagccgacagcggctatggcgatccgaccattgccggctgtatggttgcttgg
ctcttctggtgtcaagttcgagtggcgctcattgaatcgaaccgactacccgcatcagcc
ccgaagctaagccgctatctcgactttgtcgccttaggtaccgttgccgactgtgttacc
ctagcccacagccacaataatcgcgccgtggtaaagctgggattagagatcattaatcgc
tctaaccatccagcctggcaaattgtacggcaggaggccggcagtcatggcacgattaac
gcctcagctctagcctttgatgtcgccccacgcattaacggtgcctcacgcatggcaacc
ccttggccggcactcaaatttctgctaacccccaaccacagtgaggcagaacagctctgg
cttgagatcagtggttacaaccagcagcgcaaacaggtacagcagcagatggtacagcag
gcgatggcccagatccgcctaatcgacttcaggtaccaatatggcctagccctctaccta
gcagagggccaccccggtgttcaggggattgttgctagccgcctcctagagcgcagcggt
atgccggtcgcctgtatgaccccccaccgccacgacgaacagctactctccggctcaatg
cgcagtctcgacactgttcacgcccgcaaggtactacagcactgttttgacaccatcccc
gactgcggtcctgggtatgggggccacgccgccgccggtggtttcaccctctatcgagac
aagctgccacaatttatccaccacttctgcgccgcaatcgagcagcagcatcctcaaccg
tttgaacctgtgatctatagtgatggagagctcgcgaccgagctgctctccctagatctg
gtaacagagttagagcgactcgaaccgttcggacgccaatttccagcggccgcctttgag
gcgatctttactattgagcggctctttcacatgggaaaaaatggtgaacacctgcgtctg
gagctcaccgcctgccaccacagatttaacgctgtctggttttttgcactcgatccgctc
ggcaataccccagtggtgcagggccaaagctaccgctttctctttaccccgataagaaac
gactaccgagggatggaggcgctacagctaagggttactggcatcattaccgtttaa
DBGET
integrated database retrieval system
