Ectothiorhodospiraceae bacterium BW-2: D5085_17720
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Entry
D5085_17720 CDS
T11052
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebx03009
]
D5085_17720 (rimO)
Enzymes [BR:
ebx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D5085_17720 (rimO)
Ribosome biogenesis [BR:
ebx03009
]
Prokaryotic type
ribosomal protein modification factors
D5085_17720 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEP44810
UniProt:
A0A5C2HP49
LinkDB
All DBs
Position
complement(3797219..3798535)
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AA seq
438 aa
AA seq
DB search
MSGAIGFISLGCPKATVDSERILTRLRAEGYQFVNDYSAADLVIVNTCGFIDAAIEESLA
TIGEALQESGKVVVTGCLGAKTGVVEQAHPQVLAVTGPDSAAEVVDIVHRHLPPEHDPLT
ALLPAGGVKLTPRHYAYLKIAEGCNQRCSFCIIPSLRGPLVSRPLEAILTEASALVDDGV
RELLIVAQDTAAYGVDKRYQAAFWRGRPLKSRIETLVAELGELGAWIRLHYLYPYPHLEA
LIELMSDSLILPYLDMPLQHASAPLLKAMRRPAKQENILRRIESWRQQLPHLTLRSTFIV
GFPGESEADFEQLLDFLAAAQLDRVGAFTYSAVDGAVANRLPNPVPEALKQERLERFMEL
QSAISANRLQQRIGEQSVAIIDEALGGQWVGRTPAEAPEIDGVVWLDSREPSRYQAGDVV
DIEVTAADEHDLFATIVS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtgcgataggctttattagcctcggctgtcctaaggcgacggtcgattcagag
cgaattttgacccgcttaagggcggaggggtatcagtttgtcaatgactatagcgcggcc
gatttagtcattgtgaacacctgtggctttatcgatgcggcgatagaggagtcgttagcc
actatcggtgaggcgctgcaagagagtggtaaggtggtggtgaccggctgtctgggggcg
aagacgggggtggtggagcaggcgcatccgcaggtgctagcggtgaccgggccagactct
gccgccgaggtggttgacattgtccatcgccacctgccgccagagcacgatcctttgacc
gctctactccccgcaggcggcgtcaaactgaccccgcgccactacgcctatctgaagatt
gccgaggggtgtaaccagcgctgtagcttctgtattatcccctccttgcgggggccgcta
gttagccgcccgttggaggctattttgactgaggcgagtgcgctggttgacgatggggtt
agagagctactcatcgtcgcccaggatacggccgcctatggggtcgataagcgctatcag
gccgccttttggcgtggtaggccgctgaagagccgtatcgagacgctggtggctgaactc
ggtgagctgggggcgtggattcgactccactatctctacccctatccccatcttgaggcg
ctgattgagttgatgtccgattcgcttattttgccctatctcgatatgccactacagcac
gcctcagcgccactgcttaaggcgatgcgtcgcccagcgaagcaggagaatatattgcgg
cgcattgagtcttggcgtcagcagctgccccatttaaccttgcgctcgacttttattgtc
ggtttccccggggagagcgaagcggattttgagcagctactcgattttttagcggcggct
cagctcgatagggtcggtgcgtttacctattcggcggtggacggggcggtggcgaatcgg
ttgcctaatccggtacccgaggcgctaaagcaggagcggttagagcgctttatggagctg
caaagtgccattagtgccaatcggctacagcagcggatcggggagcagagtgtggcgatt
attgatgaggcgctgggggggcagtgggtggggcgaaccccggcagaggcaccggagatc
gatggggtggtttggctcgatagccgtgaaccgtctcgctatcaggcgggcgatgtggtc
gatatcgaagtgaccgcagccgatgagcacgatctgtttgccactatcgtcagttaa
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