Ectothiorhodospiraceae bacterium BW-2: D5085_17885
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Entry
D5085_17885 CDS
T11052
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebx03021
]
D5085_17885 (rpoS)
Transcription machinery [BR:
ebx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D5085_17885 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Alginate_exp
Motif
Other DBs
NCBI-ProteinID:
QEP45223
UniProt:
A0A5C2HVR7
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All DBs
Position
complement(3831885..3832799)
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AA seq
304 aa
AA seq
DB search
MDTDTDVDIESEVSLPIEQGTMSAEVNTIQIYLREIGFKSLLSAEEEIELALKIETGDRE
ARQRMIEANLRLVVKIARQFTNRGVLLPDLIEEGNLGLIHAVEKFDPRRGFRFSTYATWW
IRQTIERAIMNQSRTVRLPVHILKEINTYLRAARQLAQQLEHEPSCDEIAKAVDQPLEEV
ERLLKLSERNSSIDTPLAGEGELTLADTLIDELQPDPSEVIQDQELHALVDTWLTHLTLR
QRQVVLRRFGLHNYPAQTLEMIGIDLDITRERVRQIQNEALQKLRKIIQQRKLERDVLYP
DEHD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggataccgataccgatgtagatatcgagagcgaagtctcactccccatagagcagggc
acaatgagtgccgaggttaacaccatccaaatctatctgcgcgagatcgggtttaagtcg
ctgctaagtgcagaggaggagatcgaactggcgctaaagatcgagacgggagatcgagag
gctaggcagcgtatgattgaggccaatctgcgtctggtggtcaaaattgcacgacaattt
accaatcggggggtgctgctgccggatctgattgaggagggcaacttagggctgattcat
gcggtcgagaagtttgatccgcgtcgcggctttcgcttttcgacctatgcgacttggtgg
attcggcagacgattgagcgggcgattatgaatcaaagtcgcactgtgcggctgccggtg
catatcctaaaagagattaatacctatctgcgagcagcgcggcagctagcgcagcagctt
gagcacgagccgagctgtgatgagattgccaaagcggtcgatcagccactagaggaggtc
gagcggctgttgaagctgagcgagcgaaacagctccatcgatacgccgttagcgggagag
ggggagttgacgctagccgatacgctgattgatgagttacagcccgatccctctgaagtg
atacaagatcaggagttacatgcgctggtcgatacttggttaacccatttaaccctgcgc
cagcgccaagtggtgctgcgccgcttcggactgcataactaccctgcacagacgctggag
atgatcggtatcgatctcgatatcacccgagagcgggtgcgccagattcagaatgaggcg
ctacaaaagttgcgtaaaatcattcagcagcgcaaattagagcgggatgtcctctatccc
gatgaacacgattag
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