Ectothiorhodospiraceae bacterium BW-2: D5085_18040
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Entry
D5085_18040 CDS
T11052
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5085_18040 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebx03019
]
D5085_18040 (recQ)
03400 DNA repair and recombination proteins [BR:
ebx03400
]
D5085_18040 (recQ)
Enzymes [BR:
ebx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5085_18040 (recQ)
Messenger RNA biogenesis [BR:
ebx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5085_18040 (recQ)
DNA repair and recombination proteins [BR:
ebx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5085_18040 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
HTH_40
Helicase_C
ResIII
Cdh1_DBD_1
HTH_26
PrmC_N
Sigma70_r4_2
DUF4106
Motif
Other DBs
NCBI-ProteinID:
QEP44864
UniProt:
A0A5C2HP41
LinkDB
All DBs
Position
3863649..3865826
Genome browser
AA seq
725 aa
AA seq
DB search
MIPAPSPLTILQQQFGYDNFRGHQAAVIDTLIRGNDALVLMPTGGGKSLCYQIPAMVRNG
VGVVVSPLIALMQDQVDALRQNGVAAAALNSTLRMEQVWEIERQLQQGELDLLYIAPERL
LLPATLTQLQQLKIALFAIDEAHCVSQWGHDFRPEYTELSQLQRLFPTVPRIALTATADE
TTRKEIIFRLGLEQAQQFISSFDRPNIRYHIQESRGNAKQQLLQFIQQQHSQEAGIVYCL
SRKKVDETAAWLSAQGLTALPYHAGMVAELRLAHQRRFLHEEGVIIVATIAFGMGIDKPD
VRFVAHLNLPKSIEAYYQESGRAGRDGLPADAWMLYGLQDVITLRQMQAESSADEQHRRI
ERHKLDAMLALCETLQCRRQQLLSYFGDRLEQPCGNCDTCLEPPKSWDATVAAQKALSCV
YRTGQRFGVNHLIDVLLGANTDKIRRFGHQQISTYGIGTELNQQQWRNLYRQLIALGLLS
VDIEGHGAIHLTEASRPVLRGEQPLILREQQRKTDQPTQQRAHSNLNEAQQPLWQALKAL
RKQLADEQGVPAFTIFHDATLIELIAHHPTSLQQFATIHGIGQHKLTQYGEPFLALLQQF
EPTDNANLLSPSSPPSSRPPSSLTDTATLSLELYQRGLTVEAIAIERGLKLGTIYSHLSQ
AIGNGTLDVMAVTGLSQQQFDLIYQTMESMRDMEEKNRLKPIYEALNGTFSYEILRCVQA
AITQN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagccccctcccccctaaccattttgcagcagcagtttggctacgataacttt
cgtggccatcaagccgctgtcattgataccctcattcgtggtaacgatgcgctagtactg
atgccgaccggtggcggtaaatcgctctgctaccagataccggccatggttcgtaacggc
gtgggggtggtggtctcgcctcttatcgccctcatgcaggatcaggtcgatgccttacgg
caaaacggtgtcgccgctgccgcgcttaattcaactttaaggatggaacaggtgtgggag
attgagcgccagctacaacagggggagctcgatctgctctatatcgcccccgaacgacta
ctgctaccggccacattgacgcaactacagcagcttaagatcgccctatttgccattgat
gaggcccactgcgtctcacagtggggacacgactttcgtcccgaatacaccgaactatcg
cagctacagcggctctttccgaccgtcccccgcatcgccttgaccgccacagctgatgag
acaactcgcaaagagattatctttcgcctaggattagagcaggcgcaacagtttatcagc
agctttgatcgccccaatattcgctaccacattcaagagagtcgcggtaatgcgaaacag
cagctactacagttcattcagcagcagcactcacaagaggcgggtattgtttactgcctg
tcgcgcaaaaaggtcgatgagaccgccgcttggctctcggcccaagggttaactgctctg
ccctaccatgccggtatggtagctgagctgcgactagcgcaccagcgccgttttctgcat
gaggagggggtgattattgtcgccaccatcgcctttggcatgggaatagataaacctgat
gtccgctttgtcgcccaccttaacttgccaaaaagtatcgaggcctactatcaagagagt
ggtcgcgccggacgagatggcctaccggccgatgcttggatgctctacggcctacaggat
gtgattaccctgcgtcagatgcaggccgaatcgagtgccgatgagcaacatagacgaatt
gagcgccacaagctcgatgcgatgctagcgctatgcgagactctacagtgtcgtcgccag
cagctattaagctactttggcgataggctagagcagccgtgcggcaactgcgatacctgt
ctagagccacctaagagctgggatgccaccgttgcggcacaaaaagcgttatcgtgcgtc
tatcgaaccggacagcgttttggcgtcaaccacttaattgatgtgctgttaggggccaat
accgacaaaattcgccgctttggccaccagcagatctcgacctatggcattggcactgag
ctcaatcaacagcagtggcgcaacctctatcgacagctcatcgcgttaggactcttaagt
gtcgatattgaggggcatggggcgattcacctaaccgaggcgagtcgcccggtactacga
ggcgagcagccgctaatcttaagggagcagcagcgcaaaaccgatcaacccacccaacag
cgggcgcactcaaaccttaacgaggcgcagcagccgctctggcaggcacttaaggcgcta
cgcaaacagctagccgatgagcagggggtgcccgcctttactatttttcacgatgcgaca
ctcattgaactcatcgcccaccaccccacctcactgcaacagttcgcgaccattcacggc
atcggtcaacataaattgacacagtatggcgaaccgtttctggcgctactacagcagttt
gaaccgaccgataacgccaatctcctctccccctcctcccctccctcatcacggccacca
tctagcctcaccgataccgctaccctctcgctcgaactctatcagcgcggcttaacggtt
gaggccatcgccattgagcgaggactcaaactaggaactatctatagccacttaagtcag
gcgattgggaacggaacgctcgatgtgatggcggtcacaggtctctctcagcagcagttc
gatcttatctaccaaacgatggaatcgatgcgagacatggaggagaagaaccgcctaaag
ccgatctatgaggcgctaaatggcaccttctcatacgagattttgcgctgtgttcaagcc
gcaataacccaaaactaa
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integrated database retrieval system
