Ectothiorhodospiraceae bacterium BW-2: D5085_18535
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Entry
D5085_18535 CDS
T11052
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebx03021
]
D5085_18535 (rpoH)
Transcription machinery [BR:
ebx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D5085_18535 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_3
GntR
Motif
Other DBs
NCBI-ProteinID:
QEP44956
UniProt:
A0A5C2HR77
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All DBs
Position
4029191..4030051
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AA seq
286 aa
AA seq
DB search
MRQLELAVGSPIGSIDSYTHAINQIPMLTVEEERELAIRLQESEDIEAARKLVMSHLRFV
VHIARGYSGYGLAHADLIQEGNVGLMKAVKRFDPSHNVRLVSFAVHWIRAEIHEFILKNW
RVVKVATTKAQRKLFFNLRSSKTRLGWFSPDEVEMVANELGVTQKDVLEMESRLSGKDIG
FDGEADDDDDDSAIIAPSSYLQDSRYEPAAQIEQENWTEHNNSRLYSAIENLDARSQDIL
SSRWLAEKKSTLQELADKYGVSAERIRQLEKNALTKLQGMLAPSPA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttagagttagcagtaggttcacctatcggcagtatcgattcctatacccac
gccattaaccaaattccgatgttaacggtagaggaggagcgagagctagccatccgtctg
caagagagtgaagatattgaggcggctcgcaagttggtgatgtcccatctgcgctttgtc
gtccatattgctcgcggctatagtggatatgggctcgcgcacgccgatctgattcaagag
gggaatgtgggcttaatgaaggcggtcaaacgcttcgatcctagccacaatgttcgccta
gtatcgtttgccgtccactggattcgcgccgaaattcatgagtttatcctcaaaaactgg
cgcgtggttaaagtggcgaccacaaaggcgcaacgcaagctatttttcaatctgcgtagc
tccaaaactcgcctcggctggttctcgcccgatgaggtggagatggtcgctaacgagcta
ggggtaacgcaaaaagatgtgctggagatggagtctcgtttaagcggcaaagatatcggt
tttgatggcgaagcggatgatgatgatgacgatagcgccatcatcgccccctctagctac
ctgcaagatagccgctacgaaccggcggctcaaattgagcaggagaactggactgagcac
aacaacagtcggctctatagcgcgatagagaatcttgacgcccgcagccaagatatcctc
tcctcgcgctggctggccgaaaagaagagcaccttacaggagttggccgataagtatggc
gtctctgccgagcgtattcgccagttagagaagaacgccctgaccaaactacaagggatg
ttagccccctcgccggcctga
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