Ectothiorhodospiraceae bacterium BW-2: D5085_18710
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Entry
D5085_18710 CDS
T11052
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ebx Ectothiorhodospiraceae bacterium BW-2
Pathway
ebx00300
Lysine biosynthesis
ebx00470
D-Amino acid metabolism
ebx01100
Metabolic pathways
ebx01110
Biosynthesis of secondary metabolites
ebx01120
Microbial metabolism in diverse environments
ebx01230
Biosynthesis of amino acids
Module
ebx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ebx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D5085_18710 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D5085_18710 (lysA)
Enzymes [BR:
ebx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D5085_18710 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEP44988
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All DBs
Position
complement(4065453..4066703)
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AA seq
416 aa
AA seq
DB search
MDHFHYQENQLFCEQVALSEIAATYGTPCYLYSRATIERHWQAFDSALASIPHQICYAVK
ANSNLAILNLLARLGSGFDIVSIGELERVVAAGGDPAKVIFSGVGKRVDEIERALELGIH
CFNIESLPELARITTIAAAHGQRAPVSLRVNPDVDANTHPYISTGLKENKFGIALPQSLP
IYQQMAQSPWLEVIGVDCHIGSQLTEVAPFVAALDRVLALVEALSEVGIKLRHIDMGGGL
GIRYRDETPPLPEEYALPLLQRLKGWELELLLEPGRAIVGNAGVLLTRVEYLKPQADKQF
AIVDAAMNDLLRPSLYQAWQRVEPVMIRQGEAVSYDIVGPVCETGDFLAKERSLVLQPGD
LLVVRSAGAYGFSMSSNYNSRARVAEVMVDGAQSHLIRQREPIGQLYRGESLLPGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttcactatcaagagaatcaactcttttgcgaacaggtggcgttaagcgag
atagcggccacttatggcaccccctgctatctctattcacgggcgacgattgagcgccac
tggcaggcgtttgatagtgcgctagcctcgataccgcaccagatctgttatgccgtcaaa
gcgaactctaatttagcgattttaaacctgctcgcgcggctcggttcggggtttgatatt
gtctccatcggcgagttggagcgggtagtggccgccggtggcgatccggcgaaagtgatc
ttctccggtgtcggtaagcgggtcgatgagattgagcgggcgctggagttggggattcac
tgctttaatatcgaatcgctgccggagctagcacgcatcacgaccattgccgccgcacac
ggccagcgggcaccggtatcgctgcgagtgaaccccgatgtcgatgccaacacccacccc
tatatctccactggcttgaaagagaacaaatttggcattgcgctgccgcagtcgctgccg
atctaccagcagatggcgcagagtccttggttagaggtgattggggtcgattgccatatc
ggctcgcagctgaccgaagtggcaccgtttgtggcggcactggatcgggtcttagcctta
gtcgaggcgctcagcgaggtcgggattaaactgcgccacatcgatatggggggcgggttg
gggattcgctatcgcgatgagaccccgccgctaccagaggagtacgctctgccgctactg
cagcggctaaaggggtgggagctggagctgttgctagagccaggtagagcgatcgttggt
aacgccggagtgctgctaacccgagtcgagtatctgaaaccgcaggccgataaacagttc
gctattgtcgatgcggcgatgaacgatctgctgcgcccctcgctctatcaggcgtggcag
cgggtcgaaccggtgatgatccgtcagggggaggcggtgagttacgatattgtcgggccg
gtgtgtgaaacgggcgactttttagccaaagagcgatcgctggtgctacagccgggggat
ctgctcgtggtgcgctctgccggagcctacggctttagcatgagctctaactataacagc
cgtgcgcgagtggccgaagtgatggtcgatggggcacagagccacctcattcgccagcgc
gagcccatcgggcagctctatcgcggtgagtcgctgctccccggagtatag
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