Xiamenia xianingshaonis: J7S26_01480
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Entry
J7S26_01480 CDS
T08443
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ebz
Xiamenia xianingshaonis
Pathway
ebz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J7S26_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebz03021
]
J7S26_01480
03400 DNA repair and recombination proteins [BR:
ebz03400
]
J7S26_01480
Enzymes [BR:
ebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J7S26_01480
Transcription machinery [BR:
ebz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J7S26_01480
DNA repair and recombination proteins [BR:
ebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J7S26_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QTU84629
UniProt:
A0A9E6MQH8
LinkDB
All DBs
Position
464341..467874
Genome browser
AA seq
1177 aa
AA seq
DB search
MHESTANSTSLYRDRRSFAKIPDVMDVPNLISIQIDSFEHFRTEGLAQALRDISPIENST
KDMCVEFGRHEFGEPKYTVDECKEKDVSYQAPLFVDIRFVNRETGEIKEQQVFMGDFPLM
TPRGTFIINGTERVVVSQLVRSPGVYFDSERDKASDKVLFNAKVIPSRGAWLEFETDKRD
IFSVRIDRKRKQPATLLVRALGLAETSEEIIELFGNDDMILRTLEKDSATTKEEALIELY
KRYRPGEPPTIDSARTLLEGLFFNPQRYDLAKVGRYKINKKLGFDPDFDASTLTDEDIVR
TMQYMVALHAGDEGVNTDDIDHFGNRRIRTVGELIQNQFRIGLSRMERVVRERMSMQEPD
QITPQSLVNIRPIVAAIKEFFGSSQLSQFMDQTNPAAGITHKRRLSALGPGGLSRERAGF
EVRDVHTSHYGRMCPIETPEGPNIGLIGSLATYARVNPYGFIETPYRRVIDGKVTDEIDY
LTADEEENYTIAQANDLFNLETREFGTFDEDGVFHKAARVLCRVKAPDGTFGDPDEVPVE
QVNYMDVSPRQMTSVATSLIPFLEHDDANRALMGSNMQRQAVPLLRPSAPLVGTGIEHRI
AVDSGEILVAQNPGVVDYVDGQTIIILNDDGEYDEYLVPKFQRSNQSGCINHRPLVRKGD
EVHAGDVLADGPSCDGGELALGQNLMVAYMPWEGYNYEDAIIVSERVVAEDLLTSIHISE
YEVDARDTKLGPEEITREIPNISDDMISDLDADGIIRVGAEVFPGDVLVGKVTPKGETEL
TAEERLLRAIFGEKAREVRDTSLKVPHGSGGRVIGIYRFSREAGDELPPGVNELVRIYVA
QKRKVQQGDKLSGRHGNKGVISRVLPVEDMPYLADGTPIDVILNPLGVPSRMNVGQLLEN
HLGWAAKWGWSDDPNSTEVVPGPMHVATPVFDGATEDEISDAIEAANRNLVNINHAKYGD
KARDEFVPQLSRTGKTWLYDGRTGEKFREPITVGQSYILKLGHMVDDKIHARSTGPYSLI
TQQPLGGKAQFGGQRFGEMEVWALYAYGASNVLQEILTVKSDDTAGRVKSYEAIVKGENI
PAAEVPESFKVLVKEMKSLCLNVELEGHDHQAIDITREADEQAEADRALYENMAAASRKT
EEEENANALDDFAAGLEELLGNSDQMTGSLIEEGEDE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagagcactgcgaattcgacgagcctgtatcgggatcgccgcagttttgcgaag
attccagacgtcatggacgtccccaacctcatctccatccagatcgacagctttgagcac
ttcagaaccgaaggacttgcccaagcgctgcgcgacatcagccccatcgagaactccacg
aaagacatgtgcgtggagttcggccgccacgaattcggcgagccgaagtacacggtggac
gaatgcaaggaaaaagacgtctcgtaccaggcgcctttgttcgtcgacatccgtttcgtg
aaccgcgagaccggcgaaatcaaggagcagcaggtgttcatgggcgacttcccgctcatg
accccgcgcggcacgttcatcatcaacggcaccgagcgcgtcgtcgtctcccagctggtt
cgctcgcccggcgtctatttcgactccgagcgcgacaaggcctccgacaaggtcctcttc
aacgcgaaggtcatccccagccgcggcgcgtggctggaattcgaaaccgacaagcgcgac
atcttctcggtgcgcatcgaccgcaagcgcaagcagcccgcaacgctgctcgtgcgcgcg
ctcgggcttgcggaaacctccgaagagatcatcgagctgttcggcaacgacgacatgatc
ctgcgcacgctcgaaaaggacagcgccaccaccaaagaagaggcgctcatcgagctgtac
aagcgctaccgtcccggcgagccgcccaccatcgactcggcccgcacgttgctcgaaggc
ctgttcttcaacccgcagcgctatgacctggcaaaagtgggccgctacaagatcaacaag
aagctcggcttcgacccggacttcgacgcgtccaccctcaccgatgaagacatcgtgcgc
accatgcagtatatggtggccctgcacgccggagacgagggcgtcaacaccgacgacatc
gaccacttcggcaaccgtcgcatccgcacggtgggcgagctcatccaaaaccagttccgc
atcggcctttcgcgcatggagcgcgtcgtgcgcgagcgcatgtccatgcaggagccggat
cagatcacgccgcagtcgctcgtgaacatccgccccatcgtggccgccatcaaggagttc
ttcggaagctcgcagctgtcgcagttcatggaccagaccaaccccgccgccggcatcacg
cacaagcgccgtctgtcggcactgggcccgggcggcctgtcgcgcgagcgcgccggcttc
gaagtgcgcgacgtccacacctcgcactacggccgcatgtgccccatcgagacgcctgaa
ggccccaacatcggccttatcggctcgctcgcaacgtatgcccgcgtgaacccctacggc
ttcatcgagacgccgtaccgccgcgtcatcgacggcaaggtgaccgacgagatcgactac
ctcacggccgacgaggaagaaaactacaccatcgcccaggcaaacgacctgttcaacctc
gaaacccgcgaattcggcaccttcgacgaggacggcgtgttccacaaggccgcccgcgtg
ctgtgccgcgtgaaggcgcctgacggcacgttcggcgacccggacgaagtgccggtggag
caggtcaactacatggacgtgtccccgcgccagatgacctcggtcgccacctcgctcatc
ccgttcctcgagcacgacgacgccaaccgcgccctcatgggctcgaacatgcagcgccag
gccgtgccgctgctgcgtccgtcggccccgctcgtcggcacgggcatcgagcaccgcatc
gcggtcgactccggcgagatcttggtcgcgcagaaccccggcgtggtcgactacgtcgac
ggccagaccatcatcattctgaacgacgacggcgaatacgacgaatacctcgtgccgaag
ttccagcgctccaaccagtcgggctgcatcaaccaccgcccgctcgtgcgcaagggcgac
gaggtccacgccggcgacgtgctggccgacggcccgtcgtgcgacggcggcgagctggcg
ctcggccagaacctcatggtcgcctacatgccctgggaaggctacaactacgaggacgcc
atcatcgtgtccgagcgcgtcgtggcggaagacctgctcacgtccatccacatctccgaa
tacgaggtggacgcccgcgacacgaagctcgggccggaagagatcacccgcgaaatcccc
aacatctccgatgacatgatctcggatctggacgccgacggcatcatccgcgtcggcgcc
gaggtgttcccgggcgacgtgctcgtgggcaaggtcaccccgaagggcgagaccgagctc
acggccgaagagcgcctgctgcgcgccatcttcggcgagaaggcgcgcgaggtgcgtgac
acctcgctgaaggttccgcacggttccggcggccgcgtcatcggcatctaccgcttcagc
cgtgaagcgggagacgagctgcccccgggagtcaacgagctcgtgcgcatctacgtggcg
cagaagcgcaaggtgcagcagggcgacaagctgtccggccgccacggcaacaagggcgtc
atctcccgcgtgctgccggtcgaggacatgccctacctggcggacggcacccccatcgac
gtcatcctgaaccctctgggcgtgccttcccgtatgaacgtcggccagctgcttgagaac
cacctgggctgggccgcgaagtggggctggtcggacgacccgaactccaccgaggtggtg
cccggccccatgcacgtggcaacgccggtattcgacggcgccaccgaagacgagatctcc
gacgccatcgaggccgccaaccgcaacctcgtgaacatcaaccacgccaagtacggcgac
aaggcccgcgacgaattcgtgccgcagctgtcgcgcacgggcaagacctggctctacgac
ggccgcacgggcgaaaagttccgcgagcccatcacggtcggccaaagctacatcttgaag
ctcggccacatggtcgacgacaagatccacgcgcgctcgaccggcccttacagcctcatc
acccagcagcctctcggcggcaaggcccagttcggcggccagcgcttcggtgagatggaa
gtgtgggcgctctacgcctacggcgcctccaacgtgctgcaggaaatcctcacggtcaag
tccgacgacacggccggccgcgtgaaatcttacgaggccattgtcaagggcgagaacatc
ccggcggcagaggtccccgagtcgttcaaggtgctcgtgaaggaaatgaagtcgctgtgc
ctcaacgtcgagcttgaaggccacgaccaccaggccatcgacatcacccgcgaggccgac
gagcaggccgaagccgaccgcgccctgtacgagaacatggcggccgcctcgcgcaagacc
gaagaagaagaaaacgcaaacgccctcgatgacttcgctgccggcctggaagagcttttg
ggcaattccgatcaaatgacgggaagcctcatcgaagaaggggaggacgaataa
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integrated database retrieval system
