Xiamenia xianingshaonis: J7S26_01485
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Entry
J7S26_01485 CDS
T08443
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ebz
Xiamenia xianingshaonis
Pathway
ebz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J7S26_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebz03021
]
J7S26_01485
03400 DNA repair and recombination proteins [BR:
ebz03400
]
J7S26_01485
Enzymes [BR:
ebz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J7S26_01485
Transcription machinery [BR:
ebz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J7S26_01485
DNA repair and recombination proteins [BR:
ebz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J7S26_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QTU84630
UniProt:
A0A9E6MR38
LinkDB
All DBs
Position
467875..472278
Genome browser
AA seq
1467 aa
AA seq
DB search
MTTEFDVNNFDALRISLASAEDVRSWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPTKD
WECACGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGSPSRLGYL
LDIPPKELEKVLYFASSIVTSVDKEAREEDEEELRDELEADLEELDAERQRLIAATRKLS
VDYVPEDDDFVDDIDEDERMTPEEVEEEIADIFEEFNERKVLRQDAFDTFMRLEPKQLVP
DEALFREMRLNYRDYFTGGMGAESVRDLLDAMNLEEVAEELSEIIATGKGQKRVKAIKRL
KVVDAFLKSSNKPSDMILDVVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKR
LLDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQN
LLGKRVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELEYAANIKAAKRAV
DRGASYVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADF
DGDQMAVHVPLGAEAQAEARVLMLSSNNIKSPAHGRPLTVPTQDMIIGLYYLTAARDGFP
GEGRAFIDFDDAMNAYDARADLDLQAKIQVRLSRDLDVATAFGQFENHKAGERIETTIGR
IIFNNVLPDDYPFLNFGMNKSEISRLVESVTNRYPLSEVPPILDGLKDAGFHYATRAGVT
VSVYDATVPPEKPEILAEADAMVATIDERYAFGELTRDEHHKQVVDIWSEANDKVGDAMA
ANFDKFNPIYMMADSGARGNIKQIRQLAGMRGLMSDPKGEIIDRPIKANFREGLSVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIIREIDCGTPEGVPYGILDEKGGLDD
NLIGRCLVEDVANPETGEVMMSAGDYISSLDELAALRDAGIEEVMIRTIMTCHAEHGVCQ
KCYGWDLATSRPVNIGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITHGLPRVQELF
EARRPKGQAILADISGTLQIHEDKVKTITIHDQEGNFREYVLPTRAQTLPGIVDGCQVVI
GQQLTKGSIYPHDLLRLTDPNTTLRYIVGQVQGVYVSQGVDINDKHIEVIARQMLRKVTV
TDAGDSDLLPGRQVNRYEFERVANELIAEGKEPPVGQPLLLGITKASLATDSFLSAASFQ
ETTKVLTDAAIEGKIDHLAGLKENVIIGKPIPAGTGLPRYRDVRLTYKGRPVTAMVGDTL
PDYAPDALRDIEELLPQPQDWSLDGDGYLSMGGSYGGYYSSLLLGRRGPQLSDEDGRLYI
YDDLGVSQRWANKFSEAGIETVADLVGHTEEDLMRIEGIGVKAIEELKEGLDAHDLGYII
EDDLNATSDDMSQLLDMVFSPDDTILIGGDEPPTFDTSGEDMLGEALPRRSYQRNIDELD
ALLGSVGSFGFGVTSKDSDSLPGDDEQ
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggagttcgacgttaacaatttcgacgccctgcgcatctccctggccagcgcc
gaagacgttcgcagctggtcgcgcggcgaggtgaagaagcctgagaccatcaactaccgc
acgctcaagccggaaaaagacggcctgttctgcgaaaagatcttcggccccaccaaggac
tgggaatgcgcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgc
tgcggcgtggaagtcacgcgctcgaaggtgcgccgcgagcgcatgggccacatcgagctg
gcggctccggtgtcccatatttggtacttcaagggttcgccgtcgcgtctgggctacctg
ctcgacattccgccgaaggaactggaaaaggtgctctacttcgccagctccatcgtcacg
agcgtcgacaaggaagcccgcgaagaggacgaagaagagctgcgcgacgagcttgaagcc
gacttggaagagttggacgcggaacgccagcgcctgatcgcggccacgcgcaagctgtcg
gtggactacgtgcccgaagacgacgacttcgtcgacgacatcgacgaggacgagcgcatg
acccccgaagaggtcgaagaagagatcgccgacatcttcgaggagttcaacgagcgcaag
gtgctgcgccaggacgccttcgacacgttcatgcgtctggagcccaagcagctcgtgccc
gacgaggccctgttccgcgaaatgcgcctgaactaccgcgactacttcaccggcggcatg
ggcgccgaatcggtgcgcgacttgctcgacgccatgaacctggaagaggtggccgaggag
ctttccgagatcatcgccacgggcaagggccaaaagcgcgtgaaggccatcaagcgcttg
aaggtggtcgacgcgttcttgaagtcctcgaacaagccctccgacatgatcctggacgtg
gtgccggtcattccgcccgacctgcgccccatggtgcagctcgacggcggccgcttcgcc
acgtccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgc
ctgcttgacctgggcgctccggaaatcatcgtcaacaacgagaagcgcatgctgcaagaa
gcggtggactcgctgttcgacaacggccgccgcggccgccctgtcacgggcccgggcaac
cgtccgctgaagtcgctttctgacatgctgaagggcaagcagggccgcttccgccagaac
ctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtcgtcggcccgcagctc
aagctgcaccagtgcggcctgccgagccagatggcgctggagctgttcaagcccttcgtc
atgaagcgcctggtcgagctggaatatgctgcgaacatcaaggccgccaagcgcgccgtc
gaccgcggcgccagctacgtgtgggacgtactggaagaggtcatcaccgaacatccggtg
cttctgaaccgcgcgccaaccctgcaccgcctcggcatccaggccttcgagccggtgctc
gtcgaaggcaaggccatcaagctgcatccgctcgtgtgcaccgcgttcaacgctgacttc
gacggcgaccagatggccgtgcacgtgccgctcggcgcagaagcccaggccgaggcccgc
gtgctcatgctgtcgtccaacaacatcaagtcgccggcgcacggccgcccgctcaccgtg
cccacgcaggacatgatcatcggcctgtactacctcacggccgcccgcgacggcttcccc
ggcgaaggccgcgcgttcatcgacttcgacgacgccatgaacgcctacgacgcccgcgcc
gaccttgacctgcaggccaagatccaggtgcgcctgtcgcgcgacctcgacgtcgccacg
gcgttcggccagttcgagaaccacaaggccggcgagcgcatcgaaacgacgatcgggcgc
atcatctttaacaacgtgctgcccgacgactacccgttcctgaacttcggcatgaacaag
agcgagatcagtcgcctggtggaaagcgtcacgaaccgctatccgctctcggaagtgccg
cccatcctggacggcctgaaggacgcgggcttccactacgccacgcgcgccggcgtcacg
gtgtcggtctacgacgccacggtgccgcccgagaagcccgagattttggccgaggccgac
gcgatggtcgccaccatcgacgagcgctacgccttcggcgagctgacgcgcgacgagcac
cacaagcaggtcgtcgacatctggagcgaggccaacgacaaggtcggcgacgcgatggcg
gcgaacttcgacaagttcaaccccatctatatgatggccgactccggcgctcgaggcaac
atcaagcagatccgccagctggccggcatgcgcggccttatgtccgacccgaagggcgaa
atcatcgaccgccccatcaaggcaaacttccgcgagggcctgtcggtgttggaatacttt
atttcgacgcacggcgcccgcaagggtctggccgacacggcgctgcgcacggccgactcg
gggtatctgacccgccgtctggtcgacgttgcacaagacgtcatcatccgcgagatcgac
tgcggcacccccgaaggcgtgccgtacggcatcctggacgaaaagggcgggctggacgac
aacctcatcggccgctgcctggtagaagacgtcgccaaccctgaaaccggcgaggtcatg
atgtcggccggcgactacatctcgtcacttgacgagctggcggcgctgcgcgacgcgggc
atcgaagaggtcatgatccgcaccatcatgacgtgccatgccgagcacggcgtgtgccag
aagtgctacggctgggatctggccacgtcgcgtccggtcaacatcggcacggcggttggc
atcatcgccgcccagtccatcggcgagccgggcacgcagctgacgatgcgcacgttccac
accggcggcgtcgcgggcgaggacatcacccacggcctgccccgtgtccaggaattgttc
gaggcccgtcgcccgaaaggccaggccatcttggcggacatttccggcacgctgcaaatc
cacgaggacaaggtgaagaccatcaccatccacgaccaggaaggcaacttccgcgaatac
gtgctgccgacccgcgcccagacgctgccgggcatcgtcgacggctgccaggtcgtcatc
ggccagcagctgacgaagggctccatctacccgcacgacctgctgcgtctgaccgacccc
aacacgacgctgcgctacatcgtcggccaggtccagggcgtgtacgtcagccaaggcgtg
gacatcaacgacaagcacatcgaggtcatcgcgcgccagatgctgcgcaaggtgaccgtc
accgacgcaggcgactccgacctgctgccgggccgccaggtcaaccgctacgaattcgag
cgtgtggccaacgagcttatcgccgagggcaaggagccgccggtgggccagccgctgctg
ctgggcatcacgaaggcctctcttgccaccgactcgttcctgtcggcggcctcgttccag
gaaaccacgaaggttttgacggacgcggccatcgagggcaagatcgaccacttggccggc
ctgaaggaaaacgtcatcatcggcaagcccattcccgcaggcaccggcctgccgcgctac
cgcgacgtgcgcctgacctacaagggccgtccggtcaccgccatggtgggcgacacgctg
ccggactacgcgcccgacgcgttgcgcgacatcgaggaattgctgccccagccgcaggac
tggtcgcttgacggcgacggctatctgtccatgggcgggtcgtacggcggctattactcc
agcctgcttctgggacgccgcggcccgcagctttccgacgaggacggccgcctgtacatc
tacgacgacctgggcgtttcgcagcgctgggccaacaagttctccgaggccggcatcgag
acggtggccgatttggtgggacacaccgaagaggacctcatgcgcatcgagggcatcggc
gtgaaggccatcgaagagctgaaagaaggcttggacgcgcacgacctgggctacatcatc
gaggacgacctgaacgccacgagcgacgacatgagccagctcctcgacatggtgttcagc
cccgacgacaccatcctcatcggcggcgacgagccgccgacgttcgacacctcgggcgag
gacatgctcggcgaggcgctgccgcggcgctcgtaccagcgcaacatcgacgagcttgac
gcgctcttgggcagcgtcgggtcgttcggcttcggcgtgaccagcaaggactccgacagc
ctgcctggcgacgacgagcaatag
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integrated database retrieval system
