Xiamenia xianingshaonis: J7S26_02490
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Entry
J7S26_02490 CDS
T08443
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ebz
Xiamenia xianingshaonis
Pathway
ebz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7S26_02490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebz03019
]
J7S26_02490
Enzymes [BR:
ebz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J7S26_02490
Messenger RNA biogenesis [BR:
ebz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J7S26_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
UBA
UTP25_NTPase-like
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QTU84802
UniProt:
A0A9E6SV20
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All DBs
Position
721485..723023
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AA seq
512 aa
AA seq
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MESFDTLGLSPRLLKAVGRLGYVTPTPVQAQAIPLVLDGRDVIAAAKTGTGKTAAFSLPA
LDRIPPRKGSHGPLVLAVTPTRELAQQIGEVCEAIAEETHHRVLTVVGGVSIGPQEKALA
RGIDVLVATPGRLLDLMNQKAVSLASVEILVLDEADRMLDMGFWPSVKRIVAQTPASRQT
LLFSATIDGSIERTVGATLKDPAQVEIAHRGETADTVDQYLVRVPQNVKPDLLKAVLAAR
GAERVIVFARTRSRADSTCRRLKRAGFAAEAIHSDRSQNQRRRALDNFAAGRTDILVATD
VLARGIDVEGVSYVVNYDLPMQPEDYIHRIGRTGRAGSRGFSVSFVTPETEPMLRDIEKL
TKRTLVEMELPGFDMEAAIRAAEARTQQHAAQRDPEIQQAKREVAKRAKAKAKARERAQG
ERGAAAGRTSGRTKLQGAAGSAEQQRQKGRGAGKPGRQNGAGSPGRTPASAQKKPQKPAS
RGAAGKSDMRPGRSHRAAVASQRNRPQSRGRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatttgacacgcttggcctgtcgccgcggctgttgaaggccgtcggacgtctt
ggctacgttacgcccacgcccgttcaggcccaggccattccgctggtgctcgacgggcgc
gacgtcatcgccgccgccaagaccggcacgggcaagaccgccgcgttttcgctgccggcg
ctcgatcgcatcccgcctcggaagggcagccacggcccgcttgtgctggcggtcaccccc
acgcgcgagctggcccaacagatcggggaggtgtgcgaggccatagcagaagagacgcac
catcgcgtgctcacggtggtgggaggggtatccatcggcccgcaggaaaaggcgcttgcc
cgcggcatcgacgtgctggtggccacgccagggcgtctgctggacttgatgaaccagaag
gcggtgtcgctcgcttcggtcgaaatcctcgtgcttgacgaggctgatcgcatgcttgac
atgggcttttggccgtcggtgaagcgcatcgtcgcccagacgcctgcatcgcgccagacg
ctgctgttctcggccaccatcgacgggtccatcgagcgcacggtgggcgccacgttgaag
gacccggcccaggtggagatcgcgcaccgcggcgaaacggccgacacggtggaccagtac
ctcgtgcgcgtgccgcagaacgtgaagccggatctgctgaaggccgtgctggccgctcgc
ggcgccgagcgcgtcatcgtgttcgcgcgcacccgctcgcgcgccgattcgacgtgccgt
cggctgaagcgggcgggctttgcggccgaggctatccattccgatcgcagccaaaaccag
cgacgtcgcgcgctcgacaacttcgcggcgggtcgcactgacattctggtggcgaccgac
gtgcttgcccgcggcatcgacgtggagggcgtgtcgtacgtggtgaactacgatttgccg
atgcagcccgaagactacatccatcgcatcggacgcacgggtcgcgccgggtcgaggggc
ttttccgtgtcgttcgtgacgcccgagaccgagccgatgctgcgcgacatcgagaagctg
acgaagcgcacgcttgtcgagatggagctgcccggcttcgacatggaggcggcgatacgg
gcggccgaagcgcgcacgcagcagcatgcggcgcagcgcgaccccgagatccagcaggcg
aagcgcgaggtcgcaaagcgggcgaaggcgaaagcgaaggcgcgggagcgtgcccagggc
gagcgcggcgctgcggcgggccgcacgtcggggcgcacgaagctgcagggagcggcgggc
tcggccgagcagcagcgccagaaaggccggggcgcgggcaagccgggcagacaaaacggc
gcgggctcgcccgggcggacgccggcgtcggcgcagaagaagcctcagaagccggcgtcg
cgtggggcggcggggaagtccgacatgcggccgggccggtcgcaccgggcggccgtcgca
agccagcgcaaccgcccgcagtcgcgcggtcggcgatag
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