Xiamenia xianingshaonis: J7S26_07355
Help
Entry
J7S26_07355 CDS
T08443
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ebz
Xiamenia xianingshaonis
Pathway
ebz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7S26_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebz03019
]
J7S26_07355
Enzymes [BR:
ebz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J7S26_07355
Messenger RNA biogenesis [BR:
ebz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J7S26_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
AAA_22
HEM4
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QTU84160
UniProt:
A0A9E6SU48
LinkDB
All DBs
Position
complement(1950866..1952584)
Genome browser
AA seq
572 aa
AA seq
DB search
MTTFADLGLSERALNAVEKLGYDTPTPVQEQAIPYVMEGRDVIAAASTGTGKTAAFLLPT
MGSMPSVKRGRRPPRMLVVSPTRELAQQIAHTAMQVGRKTNHFVTTVFGGSSYGPQINEI
RRGTDILIATPGRLNDLIDREVVDLGAIEVLVLDEADRMLDMGFLPDVTKIVEQTPTDRQ
TLLFSATIDESIQNNLGSLLRDPAVVEVSRNGETARTVEQFILPIKNFQKQELLEALLEE
KGHERVIVFARTKFRTEECMEALRAAGYQAESIHSDKNQSQRRRALNAFRKGDAKVLVAT
DVLARGIDVPEVDYVVNFDLPDMPEDYVHRIGRTGRAGEEGLAISFVTRESRKTLREIEH
LIGKDLPYMELESFETDPSLIEKGGKDAKGSRRGGGKRGGAGRNEGRNRSRNERGGRREG
QRRDRDEARGRDEHDKRRGGAGRPGKSTRTSERGRDAAKANERSTRGFRGDFHTSQEQDK
RSRFASRPQKGAKGGRGPSRTDRTDERRGGYRGSNRDERRDERSERRSENSNARNAQQRI
RQTAKKHQVNDQAVGPDKPAKFSTYDYSKFVK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctttgctgacctcggcttgtccgaacgtgcgctcaacgccgtcgaaaagctc
ggctacgacacccccaccccggtgcaggagcaggccatcccctacgtcatggaaggccgc
gacgtcatcgccgccgccagcacgggcaccggcaaaaccgccgccttcctgctgcccacc
atgggatcgatgccgagcgtgaagcgcgggcgccgcccaccgcggatgctcgtcgtcagc
cccacgcgcgagctcgcccagcagatagcgcacacggccatgcaggtcggccgcaagacg
aaccatttcgtgaccacggtgttcggcggctcgtcctacggtccgcagatcaacgagatc
cgccgcggcaccgacatcctcatcgccacgccgggccgcctgaacgacctcatcgaccgc
gaggtcgtcgacctcggcgccatcgaggtgctcgtgctggacgaggccgaccgcatgctc
gacatgggcttcctccccgacgtgacgaagatcgtcgagcagacgcccaccgaccgccaa
acgcttttgttctcggcgaccatcgatgagagcatccagaacaacttggggtcgcttttg
cgcgacccggctgtcgtcgaagtgtcgcgtaacggcgaaacggccaggactgtggagcag
ttcatcctccccatcaagaattttcagaagcaagaactgctggaagcgctgttggaagag
aagggccacgagcgcgtcatcgtgttcgcgcgcacaaaattccgcaccgaggaatgcatg
gaggcgctgcgtgcggcgggttaccaggccgagtcgatccactcggacaaaaaccagtcg
cagcggcgtcgcgcgttgaacgcgtttcgcaagggagacgcgaaggtcctggtcgcgacg
gacgtcttggcccgcggcatcgacgtgcccgaagtggactacgtcgtgaacttcgatctg
cccgacatgcccgaagactacgtgcaccgcatcggacgcacgggccgcgcgggcgaagag
ggtcttgccatttcgttcgtaacacgtgagtcacgtaaaacgctccgtgaaattgagcac
ctgatcggcaaggatctgccgtacatggaactggagagctttgagactgacccgagcctt
atcgagaagggcggcaaggatgcgaaggggtcgcgccgcggcggcggcaagcgcggaggc
gccgggcgcaacgaaggccggaaccggagcagaaacgagcgcggcggtcgtcgcgaaggc
cagcggcgcgaccgcgacgaggccagaggccgggacgagcacgacaagcgccgcggaggt
gccggacgtccgggcaagtcgacgcggacctcggagcgcgggcgcgacgccgcgaaagcg
aacgagcgcagcacccgcgggttccggggcgacttccacacgtcgcaagagcaggacaag
cggtctcggtttgccagccggccgcagaagggcgcaaagggcggacgcgggccgtcgcgc
accgaccgcaccgacgagcgccgcggcggctatcgcggcagcaaccgggacgagcgccgc
gacgagcgcagcgagcgccgctcggagaactccaacgcgcgcaacgcccagcagcgcatt
cgtcagacggccaagaaacaccaggtcaacgaccaggctgtcggcccggacaagccggcc
aagttcagcacgtacgactacagcaagttcgtgaaatag
DBGET
integrated database retrieval system
