Pectobacterium atrosepticum SCRI1043: ECA0002
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Entry
ECA0002 CDS
T00186
Symbol
asnC
Name
(GenBank) AsnC-family transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eca03000
]
ECA0002 (asnC)
Transcription factors [BR:
eca03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
ECA0002 (asnC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
NirdL-like_HTH
HTH_11
MarR_2
HTH_5
HTH_34
MarR
AsnC_trans_reg_3
Sigma70_r4_2
DNA_pol_D_N
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CAG72926
UniProt:
Q6DB96
LinkDB
All DBs
Position
complement(565..1026)
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AA seq
153 aa
AA seq
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MAEIYQIDNLDRGILSALMENARTPYAELAKQFSVSPGTIHVRVEKMKQAGIIIGTRLDV
NPKQLGYDVCCFIGIILKSAKDYPSALEKLNNLEEVVEAYYTTGHYSIFIKVMCRSIEAL
QHVLINKIQTIDEIQSTETLISLQNPIMRTIAP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaatttatcagatcgataatctcgatcgcggcattctttccgccttaatggaa
aatgcgcgcaccccttatgccgaactggcaaaacagttttccgtcagtccaggaacgatc
cacgttcgggtggaaaaaatgaaacaggcgggcatcattatcggcacgcgtctggacgtg
aatccaaaacagttaggctatgacgtgtgctgctttatcggcatcattctgaaaagcgcc
aaagattatccctcggcgctggaaaagctaaacaatctggaagaagtggtcgaggcctac
tacaccactgggcattacagtatctttattaaggtcatgtgtcgttcgatcgaggcgctg
caacacgtacttatcaacaagatccaaacaattgatgaaattcagtccaccgaaacactg
atctccctgcaaaaccccattatgcggacgatcgccccgtaa
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