Pectobacterium atrosepticum SCRI1043: ECA0165
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Entry
ECA0165 CDS
T00186
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00541
Biosynthesis of various nucleotide sugars
eca01100
Metabolic pathways
eca01250
Biosynthesis of nucleotide sugars
Module
eca_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ECA0165 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eca01005
]
ECA0165 (rfaD)
Enzymes [BR:
eca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
ECA0165 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
eca01005
]
Core region
ECA0165 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
CAG73085
UniProt:
Q6DAT7
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All DBs
Position
complement(185612..186544)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFVNLVDLDIADYVDKEDFVASI
VAGDDLGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRSIPFLYASSAATY
GGRNDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHNKGGVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMTWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctaccgggacattctggttgtcgataacctgaaagacggcaccaagttcgtc
aatctggtcgatctggacatagcagattacgtggataaggaagatttcgtcgccagcatc
gttgcgggtgacgatctgggcgatatcgaggccgtattccatgaaggtgcctgctcctcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattccaaagatgtg
ctgcactactgcctcgatcgcagtattccgttcctgtatgcctcttcggccgcgacctac
ggcggtcgtaacgataacttcatcgaagaccgccaatacgagcagcctctgaacgtctat
ggctactccaagttcctgttcgatcagtacgtgcgtgagattctgccggaagcggaatcg
cagatctgcggcttccgctatttcaacgtctatggaccgcgcgaaggtcacaaaggcagc
atggcgagcgtggcgttccacctgaacaaccagattaatcagggtgaaaatccgaagctg
ttctctggtagcgaaaacttcaaacgtgacttcatttacgtcggtgatgtcgcggccgtc
aatctgtggttctggcaaaacggtgtttcgggcatcttcaactgcggtaccggtcgtgcc
gaatccttccaggccgttgccgacgccacactcgccttccataacaaaggcggcgtggag
tacatcgaattccctgagaaactgaaaggccgctatcaggcctatacgcaggccgacctc
accaacttgcgggccgcgggctacgataagccgttcaaaaccgtcgccgaaggcgtagcg
gaatatatgacttggctgaaccgtaccgtttaa
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