Pectobacterium atrosepticum SCRI1043: ECA0266
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Entry
ECA0266 CDS
T00186
Name
(GenBank) putative signaling membrane protein
KO
K18765
RNase E specificity factor CsrD
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA0266
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECA0266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
CAG73186
UniProt:
Q6DAI7
LinkDB
All DBs
Position
311016..312953
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AA seq
645 aa
AA seq
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MGFTTRFSILIVLLTLLAIFLMFFSSIFSLCYYSQLRTEQQLREVTASIDQALLVQSPEN
IQYWLPGMMKTAGIVALEIQDNDSPLYSIQLPEAGWERTHLYHEVEFPLMHHTNMEIALK
YVDPLIGLPRFVVSTLSVLLAAGLMLLMLYFSIRWLRHQAAGQEELEKRAQRILKGERES
VMQGSVREWPVNTSGALDQLLSDLVEAREERGRVDTLIRAFAAQDAETGLSNRLFFDNQL
TTQLEDGEEVGTHGIVMMIRVPDFETLQETHGYSNVLQEYRFTLVNLLSTFVMRYPSALL
ARYFSSDFTVLLPHRTLKEANAIATQLVKAIDILPACPLIDREEVLHIGICAYRGGQSAE
QVMESVEDATRNAVLQGGNSWCVFDRQVPDKSRGSVKWRTLLEQTLARGGPRLYQKPAVT
KEGVVHHREMMSRIYDGEQELLAAEYMPLVQQLGLATSYDRQLVARIVDLSANWPGETLG
LPVSVDSLLQKPFLRWLKEILLQCPKTQRQCILFELAEADVCQYIGRLRPVLNLILGLGC
RLAVTQAGLTLVSTTYIKSLPVEIIKLHPGLVRSLERRPENQLFVQSLTEACKGTQTRVF
AAGVRTKEEWRMLLGKGVYGGQGDFFATSVLVTDELKKYSPQHRV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggatttacgaccagattctcgatactcatagtattgctgacgcttctcgcaattttt
cttatgtttttcagtagtatatttagcctctgttattatagccagttgcggaccgagcaa
cagttgcgtgaggtcacggccagtatcgatcaggcattattagtgcaatcgcccgaaaac
atccaatattggctaccgggaatgatgaaaacggcaggcattgtcgcgctggagattcag
gataacgattcgcccctctactcaatacagctgcccgaggctggctgggaacgcacgcac
ctctaccatgaggtcgaattcccgctgatgcaccatacgaatatggagattgccttaaaa
tatgtcgatccgctgattggtttaccgcgcttcgtggtgtcgacgctgtcggtgttgctg
gctgctggtctgatgctcctgatgctgtatttctccatccgctggttacgccatcaggca
gccggacaggaagagttggaaaagcgcgcacagcgtattctcaaaggcgagcgtgaatcg
gttatgcaggggtcggtacgtgaatggccggtcaataccagcggggcgctcgatcaactg
ttgtcagatttagtggaagcgcgggaggagcgtgggcgggttgataccttaatccgtgct
ttcgccgcgcaggatgccgaaaccgggctgagcaatcgtctgttttttgataaccaactg
accacacagttggaagatggtgaagaggtggggacgcacggcatcgtcatgatgatccgt
gtgccagattttgaaacgttgcaggaaacgcacggctatagcaatgtgcttcaggagtat
cgttttacgctggtaaacctgctgtcgacatttgtcatgcgttatccctctgcgctgctg
gcgcgttatttcagcagcgatttcactgtattactccctcaccgtacgctaaaagaagcc
aatgcgattgccacgcaactggtgaaagccatcgatattcttcctgcctgcccgttgatc
gaccgggaggaggttcttcacattggtatctgtgcctaccgtggtgggcaaagcgccgag
caggtgatggaaagtgtggaagatgcaacgcgcaatgcggtattgcagggcggtaacagc
tggtgcgtgtttgacaggcaagtgccagacaagagtcgcggcagcgtaaaatggcgaact
ttgttggaacagacgttggcgcgcggcggcccgcgactgtatcaaaagcctgcggtcaca
aaagagggcgttgtgcatcatcgtgaaatgatgagccggatttatgacggagaacaggaa
ctgctcgcagccgagtatatgcctctggtgcaacaactgggactagcgaccagttatgat
cggcagctagttgcacgaattgttgatttgtcagcgaactggcccggagaaacactgggt
ctaccggtaagtgtagactcacttttgcaaaaaccttttttgcgttggctgaaagaaata
ttgctgcaatgtcctaaaacgcagcggcagtgcattttatttgaacttgcagaggcagat
gtttgtcaatatatcggccgtctgcgtccggttctcaatttgatcctgggattaggctgt
cgtctggcagttacgcaggcggggttgacgctggtcagcacgacgtatatcaagtcactt
cccgtggagatcatcaagcttcatcccgggttggtgcgcagccttgaacgtcgtccagaa
aatcagctttttgtacaaagcctgaccgaggcgtgtaaaggaacgcaaacgcgggtgttt
gccgcgggtgtgcgtaccaaagaggagtggcggatgctgttgggcaagggagtttatggt
gggcaaggcgatttttttgccacatcagtccttgtaacagatgagctgaaaaaatattca
ccgcagcatcgtgtttag
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