Pectobacterium atrosepticum SCRI1043: ECA0625
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Entry
ECA0625 CDS
T00186
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECA0625 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA0625 (groL)
03110 Chaperones and folding catalysts [BR:
eca03110
]
ECA0625 (groL)
03029 Mitochondrial biogenesis [BR:
eca03029
]
ECA0625 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eca04147
]
ECA0625 (groL)
Enzymes [BR:
eca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ECA0625 (groL)
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ECA0625 (groL)
Chaperones and folding catalysts [BR:
eca03110
]
Heat shock proteins
HSP60 / Chaperonin
ECA0625 (groL)
Mitochondrial biogenesis [BR:
eca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ECA0625 (groL)
Exosome [BR:
eca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ECA0625 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ECA0625 (groL)
Exosomal proteins of breast cancer cells
ECA0625 (groL)
Exosomal proteins of colorectal cancer cells
ECA0625 (groL)
Exosomal proteins of bladder cancer cells
ECA0625 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAG73540
UniProt:
Q6D9J0
LinkDB
All DBs
Position
697515..699164
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKQSVPCSDFKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEVAIQGRVTQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAAASISVSGLKGDNEDQNVGIKVALRAMESPLRQIVINAGEEASVIANTVKAGEGSYGY
NAYTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPKGDAPDLGAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctgcgcggcgtg
aatgtactggctgatgcagtgaaggttaccctgggcccgaaaggccgtaacgtagttttg
gataaatccttcggtgcaccgaccattactaaagacggtgtatctgttgcgcgtgaaatc
gaactggaagacaagtttgagaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggctcagtccatcatc
actgaaggcctgaaagctgttgctgcgggcatgaacccgatggatctgaagcgcggcatc
gacaaagcagtgattgctgctgttgaagaattgaaaaaacaatctgttccttgctctgat
tttaaagcaatcgcacaggttggtaccatctctgcaaactccgacgaaaccgtgggtaaa
ttgattgcagaagcgatggagaaagtgggtaaagaaggcgttatcaccgttgaagaaggc
acaggcctgcaagacgagttggacgtggttgaaggtatgcagtttgaccgtggctacctg
tctccgtacttcatcaacaagccggaaaccggttctattgagctggaaagcccgttcatt
ctgcttgccgacaaaaaaatctccaacatccgtgaaatgctgccagtactggaagccgta
gcgaaagcgggtaaaccgctgctgatcattgcagaagatgttgaaggtgaagcgctggcg
acactggtagtgaacaccatgcgcggtatcgtgaaagtggctgcggtgaaagcaccgggc
ttcggtgaccgtcgtaaagccatgctgcaagatatcgcgacgttgactgcgggtaccgtg
atctctgaagagattggtctggagctggaaaaagcgacgctggaagatttgggtcaggct
aaacgtgttgttatcaacaaagacaccaccatcatcattgatggcgtgggtgatgaagtg
gcaattcagggtcgtgtgactcagattcgccagcagattgaagatgcaacgtctgactac
gacaaagaaaaactgcaagagcgtgtggctaaactggcgggcggcgtagccgttatcaaa
gttggcgccgcgactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgcgctg
cacgccactcgcgccgctgttgaagaaggcgttgttgcaggtggtggtgttgcactgatt
cgtgctgcggcttctatcagtgtatctggcctgaaaggcgataacgaagaccaaaacgtg
ggtatcaaagttgcgctgcgcgcaatggagtctccgctgcgtcagatcgtaatcaacgcc
ggtgaagaagcctccgtgatcgccaataccgttaaagcgggcgaaggcagctacggttat
aacgcctataccgaagaatacggcgatatgatcgcaatgggtattctggatccgaccaaa
gtaacgcgttctgctttgcagtatgcagcttctattgctggtctgatgattaccaccgaa
tgtatggtgaccgacctgccgaaaggcgatgcgcctgatttaggtgctggtggcatgggc
ggcatgggtggaatgggcggcatgatgtaa
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