Pectobacterium atrosepticum SCRI1043: ECA0716
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Entry
ECA0716 CDS
T00186
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECA0716 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA0716 (pnp)
03016 Transfer RNA biogenesis [BR:
eca03016
]
ECA0716 (pnp)
Enzymes [BR:
eca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECA0716 (pnp)
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECA0716 (pnp)
Transfer RNA biogenesis [BR:
eca03016
]
Prokaryotic type
tRNA degradation factors
ECA0716 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_PDCD11
KH_2
S1_RRP5
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
DUF4172
UPF0181
S1_TP0910
KH_SLS1_2
CFAP251_C
Motif
Other DBs
NCBI-ProteinID:
CAG73631
UniProt:
Q6D9A1
LinkDB
All DBs
Position
784066..786186
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFSGPIGVARVGYLNDQYVLNPTTDELKESRLDLVVA
GTQGAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWEWHAPAVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVNVIKTDVVAALQAEDETLNAGEIQEILGNI
EKNVVRGRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVRIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANPQTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgtcacattagagaca
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgacacagcggta
ttcgttaccgttgtcggcgctaaaaacgctaaacccggccaaagtttcttcccattgacg
gttaactatcaggagcgtacctacgctgctggacgtttccccggtggttttttccgccgt
gaaggtcgtccaagtgaaggcgaaacgctgacttcccgtctgattgaccgtccgattcgc
cctctgttcccagaaggcttcctgaatgaagttcaggtgattgcgactgtggtttccgtc
aacccacaggttagccctgatatcgttgccatgattggtgcttctgcggcgctgagcctg
tctggtatcccgttcagcggccctatcggtgttgcacgcgtcggttacctgaacgaccag
tatgtcctgaacccaacgacagatgaactgaaagaaagccgtctggatctggtcgttgca
ggtactcaaggcgctgttctgatggtggaatccgaagctgaattgctgagtgaagatcag
atgctcggtgcggtggtctttggccacgagcaacagcaaatcgttatcgaaaacatcaac
tcactggttgcagaagctggcaaaccgaagtgggaatggcatgcgccagcagttaatgtt
tctttagagcagcgcgtacaggctctgtctgaagcacgtttgggtgacgcttaccgcatt
accgaaaaacaagagcgttatgcacaagttaacgttatcaaaactgacgttgttgccgct
ctgcaagccgaagatgaaacgctgaatgccggtgagatccaggaaattctgggcaacatt
gagaaaaacgttgtgcgtggccgtgtactggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggcgtactgccgcgtacccacggttct
gcgctgttcacccgtggtgaaacgcaggcgttggtaactgcaacgctgggtactgagcgt
gacgcgcaaaatatcgatgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactgtgtcggtgaaaccggtatggttggttcgcctaagcgccgtgaa
atcggtcacggtcgtctggctaaacgcggcgtgttggctgtaatgccgaaggcgaacgaa
ttcccgtacaccgtgcgtgtggtgtctgaaatcacggaatctaacggttcttcttccatg
gcgtctgtctgcggtgcttctctggcgctgatggatgcaggtgtgccaattaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgtgctgtccgac
attctgggtgacgaagaccacctaggcgatatggacttcaaggttgctggtagccgtgaa
ggtatcaccgcgctgcaaatggatatcaagatcgaagggattactcgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcgcgtttgcacattctgggtgtgatggagcaggca
atcagcacgccgcgtggcgatatctccgaatttgcaccacgtattcacaccatcaaaatc
agtaccgataagattaaagacgtgatcggtaaaggtggttctgtgattcgtgcgctgacg
gaagaaacgggcacgactattgaaattgaagacgatggtactgtgaggattgcttcaacc
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gttggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgttgct
atcggcggcggcaaagaaggcttggtgcatatttctcagatcgcagacaagcgcgtagag
aaagtgactgactatctgcagatgggtcaggaagtgccggtcaaggttctggaagttgat
cgtcagggccgcgtgcgcttaagcatcaaagaagccaatccgcaaactcaggaagcggca
gccccgtcttctgaggaataa
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