Pectobacterium atrosepticum SCRI1043: ECA0804
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Entry
ECA0804 CDS
T00186
Symbol
rhiE
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ECA0804 (rhiE)
Enzymes [BR:
eca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ECA0804 (rhiE)
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
CarbopepD_reg_2
CdAMP_rec
BPA_C
Motif
Other DBs
NCBI-ProteinID:
CAG73718
UniProt:
Q6D915
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All DBs
Position
890040..891770
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AA seq
576 aa
AA seq
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MKRSVLLLVGAMLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKVTFGEDGSAVSMVTGSKN
IVTNLSGAARDPSKTRSAYLDYYINNGNVKGVKDFVPERLEVLRNDREMAHVAYIDDRGG
LLKLEYHLIMRRGVSGLYSYVVAENSGSQGVNVSELRNVYRFDPARLDHLYSGVRQGKPL
LYRQLEASPKVQDETWRLPDGSIYSKYDFAGYMRTAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMKAPPGWKKFYGPWLLYINEGDTEQVLADAQR
QALTETVSWPYKWVDDSRYARDRTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQAT
TDSQGNFAIPHVRPGNYHLSVYANSGTQPGILAEQALSVSGDKQVLPMITLPKAESVVWA
IGQANRQASEFRFGNEVRNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEQKTYFLNIALAAASNGGMSEPTVPQLTVMVNGTTLETLTYDNDKAIYRGALQSGRYHV
ARIPVSSGFLKNGNNTITLQLKGGSVMYDVVTLSKE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggcgccatgctggcaccctatagctatagtgcg
caggataatgccgtgtcgttatccgtttccggtttgaataccgttctggataacggtctg
ctgaaagtcacattcggggaggatggcagcgcggtgagcatggtgacgggtagcaaaaat
atcgtcactaacctgtccggtgcggcacgcgatccgagcaaaacgcgtagcgcttacctc
gattactatatcaataatggcaatgttaaaggcgtcaaagatttcgtccctgagcggctg
gaggtgctgcgtaacgatcgtgagatggcgcatgtggcctatatcgacgatcgaggcggg
ctgttaaagctcgaatatcatctgattatgcgtcgcggcgttagcgggctttacagttat
gtggtagccgaaaatagcggaagtcagggtgttaacgtcagtgagctgcgtaacgtctat
cgcttcgatcctgcacggttagaccatctctacagcggcgttcgccagggtaagccgctg
ctctatagacagcttgaagcctcgccaaaggtgcaggatgaaacctggcgactgccggat
ggcagtatctattccaaatatgacttcgctggttatatgcggaccgcgcctttctggggt
gttttcggcaatggcgtgggcgcatggttgattcacggcaaccgggagtatttctccggt
gatgcgctcaagcaggatttgttggtgcatcaggatgcgatcattctgaactatatgacg
gggtcgcactttggcacgccggatatgaaagccccgccgggctggaaaaaattctacggc
ccgtggctgctgtacattaacgagggcgataccgaacaggtgctagcggatgcccagcgt
caggcactgacggaaacggttagttggccgtataaatgggtggacgattcccgctatgcg
cgcgatcgcacgcaggtcagcggacgcgttgccagccagcagccagtcactgttgtgctt
tcatcgtcattggatgaaccgtttgatgtgcaaacccgcggctattcgtatcaggcaacg
acagactcgcagggaaattttgctattcctcatgtccgaccgggtaattaccatctgtcc
gtgtacgccaacagcggtacgcagccggggatattggcagagcaagcgctgtccgtttct
ggtgataagcaagtactgccgatgataacgctgcctaaagccgaatcggttgtctgggcc
attgggcaagccaatcggcaggcgagcgaattccgctttggtaacgaagtacgtaacacc
cgctggcagcatgaggttcctgcaaatctgacgttcgatattggccgcagcgattatcag
cgcgactggtattacgcgcagaccaaaccgggaaaatgggatatccgtttcgccctacaa
cctgagcagaaaacctatttcctgaacatcgcactggcggcagccagcaacggcggcatg
agcgagccaaccgtgccacagctgacggtaatggtaaacggcaccacgctggagacacta
acttacgacaacgataaagccatctatcgcggcgcgctacagagtggtcgctatcacgtt
gcacgtatccccgtatcatccggtttcctgaaaaatggcaacaacaccatcacactgcaa
ttaaaaggcggcagcgtgatgtatgacgtggtgacgttaagcaaggaataa
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