Pectobacterium atrosepticum SCRI1043: ECA1288
Help
Entry
ECA1288 CDS
T00186
Name
(GenBank) LysR-family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eca03000
]
ECA1288
Transcription factors [BR:
eca03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECA1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
CAG74198
UniProt:
Q6D7N7
LinkDB
All DBs
Position
1463404..1464303
Genome browser
AA seq
299 aa
AA seq
DB search
MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGIHFIDIARRLVQTHDDAVGEIKSYATGYKGNIVLAVLPSMAVEWLPQVLAQYHRAYP
KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSPGTFSSRMLFADSFYLICHNSHPLAQQ
NSVDVIDVAQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDKERQLSVCAKEFYDFLLERAESFVPAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgggcctttatcgcactgactgaaactgataatttc
acgcgtgccgctcagaaaataaatctctctcagcctgcatttagctcattaattgctggg
ttagaggaagaggtcggctatcgtctatttgaccgcgatacacgtaaagtgcagctcaat
gctgatggcattcatttcattgatattgcccgtcggctggtgcaaacccacgacgatgcc
gtcggtgaaatcaagtcttatgccacggggtataaagggaatattgtgttggcggtgctg
ccgtcaatggcagtggaatggctgcctcaggtgctggcgcaatatcaccgcgcttaccct
aagattaaggttgagttgctggatacgcagtgggatcgctgcctgaaagcggtactagac
ggtcgtgccgatctggcgctaacggcggggcaaccgtcgccgggaacgttcagctcccgc
atgctgttcgccgacagcttttatctgatctgccataactcgcacccgctggcgcagcaa
aacagtgttgatgtgatcgacgtggcgcaatatccgtttgttgggttttgcaaaggcacc
agtatccggcagtacaccgatcagcttatcgaaccggaaggctttaactacgtgctagaa
gtgcgtcagctgaccaccatgatggggttggtggcggcgaattacggtgtgagcattgtg
acggggctgacgctgtttcaattccagcacaaagatatcgcgattatcccctttcgggat
ttatcgttgcagcgcggcatctatctagtgacggataaggagcgccagctttcggtatgt
gcaaaagagttttatgattttcttctggagcgggcggaaagttttgttcctgccgcgtga
DBGET
integrated database retrieval system
