Pectobacterium atrosepticum SCRI1043: ECA1499
Help
Entry
ECA1499 CDS
T00186
Symbol
pnl
Name
(GenBank) pectin lyase
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ECA1499 (pnl)
Enzymes [BR:
eca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
ECA1499 (pnl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAG74408
UniProt:
Q6D727
LinkDB
All DBs
Position
1743889..1744833
Genome browser
AA seq
314 aa
AA seq
DB search
MAYPTTNLTGIIGFAKAANVTGGSGGKVVTVNSLADFKSAVSGSTKTIVVLGASLKASAL
TKVVFGSNKTIVGSFGGANVLTNIHLRAESNSANVIFQNLVFKHDVSIKDNDDIQLYLNY
GKGYWVDHCSWPGHTWSDSDGSLDKLIYIGEKADYVTISNCLFSNHKYGCIFGHPADDNN
SAYNGYPRLTICHNYYENIQVRAPGLMRYGYFHVFNNYVNKFNLAFTVAQNANVLSERNV
FGTGAEKKGMVDDKGNGSTFTDNGSSPAAVASKSTAAKWTASSNYSYSLMTTAAAKSWVV
SNSGAQSSALKFPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttacccaacaacaaatcttactgggattatcggttttgcaaaagcagcgaatgtt
accggagggtcgggcggtaaagttgttacggtaaattctctggccgattttaagtccgcc
gtgagcggttccacaaaaaccatcgtggtgctgggagcatcgctaaaagcatcagccttg
actaaggtcgtatttggcagcaataaaaccattgtcggttctttcggcggggctaatgta
ctgactaatatccacctgcgcgctgagagcaattcagctaacgtcattttccagaatctg
gtttttaaacatgatgtctcaatcaaggacaatgacgatatccaattatatctgaactac
ggtaagggatattgggtggaccactgttcatggccggggcatacgtggagtgatagcgac
ggcagcctcgataaactgatttatatcggtgaaaaagcggattacgtcacgatcagtaac
tgcttattctcaaaccataaatatggctgtattttcggtcatccggcagatgacaataat
agcgcatacaatggctacccacgtttgaccatctgccacaactattacgaaaatattcaa
gttcgtgcgccaggcctgatgcgttatggttatttccacgtattcaacaactacgtcaat
aaattcaacctggcctttacggttgcgcagaatgccaatgtgctttctgaacgtaacgta
tttggcaccggcgctgaaaagaaaggcatggttgatgataaaggtaatggttcaaccttt
acggataatggcagttcaccggcggctgtagcgagcaaatcaactgcggctaaatggacg
gcatcatctaactattcatacagtttgatgacaaccgcggcggctaaatcctgggttgtt
tctaattctggagcgcaaagcagtgcgctgaaattcccgtcataa
DBGET
integrated database retrieval system
