Pectobacterium atrosepticum SCRI1043: ECA1856
Help
Entry
ECA1856 CDS
T00186
Name
(GenBank) putative FAD-binding oxidase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00310
Lysine degradation
eca01100
Metabolic pathways
eca01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
ECA1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_17
Fer4_20
Fer4_18
Fer4_9
Fer4_10
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
CAG74759
UniProt:
Q6D632
LinkDB
All DBs
Position
2108085..2111138
Genome browser
AA seq
1017 aa
AA seq
DB search
MIPQITQSPGLVQPVLNFLEALKKNGFTGDTATDYADRLTMATDNSIYQLLPDAVVFPRS
TADVAILSRLAGEARFSGLTFTPRGGGTGTNGQALNRGIVVDMSRYMNRILEINPEQGWV
RVEAGVIKDQLNQYLKSYGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAVLLGGEMLDTQAMPVELAEQLAEEDSSIGRIYHTVLHRCREQRALIIDKFPKLNRFLT
GYDLRHVFSDDLRTFDLTRILTGAEGTLAFITEAKLDITPLPKSRRLVNIKYDSFNSALR
NAPFMVEAKALSVETVDSKVLNLAREDIVWHSVSELITDVPNQEMLGLNIVEFAGDDEAL
INGQVESLCQRLDTLLATGEDGIIGYQTCNDLTGIERIYAMRKKAVGLLGNSKGLAKPIP
FAEDTCVPPQHLADYIEEFRALLDSHNLTYGMFGHVDAGVLHVRPALDMCDPQQEMLMKQ
LSDQIVALTAKYGGLLWGEHGKGFRAEYSPEFFGPELYAELRRIKAAFDPDNRLNPRKIC
APLDVDAPMMKVDAVKRGTFDRTIPLTVRTAFRGAMECNGNGLCFNFDARSPMCPSMKIS
GNRIHSPKGRATLVREWLRLLAEQGVDPVVLENALPQQKLSLRAFIQKTRNTWQAKQGDY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPVRDYLVAGVESYA
PLMARSPKTFNFFLKMPLLNNLSRSQIGMVDLPLLSSPSLRQQFAGHSGVNTTLEQLEQL
SEQARQQYVLIVQDPFTSYYDAQVVADFVHLIEKLKLKPVLLPFSPNGKAQHIKGFLQRF
AKTASKTAGFLNRVAKLGMPMVGVDPALVLCYRDEYREILGEKRGDFQVQLVHEWLVTAL
ADSTPQSSTGESWYLLGHCTETTALPISTKQWADIFSHFGAKLENVSVGCCGMAGTYGHE
AKNLANSQGIYALSWQQVLQKLPQKRCLTTGYSCRSQVKRMEGSALRHPLQALLEIL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatcacgcaatctcccgggctggtccagccggtgcttaattttctggaa
gcattgaagaaaaacggattcacgggcgatacggcgactgattatgccgatcgtctgacg
atggcgacggataacagtatctatcaactcttgccggatgcggtggtcttcccccgttca
accgccgatgtcgcgatcctatcgcgactggcgggtgaggcgcgcttttcagggctaacc
tttaccccacgcggtggcgggacaggaacgaacgggcaggcgctgaatcgcggcatcgtg
gtcgatatgtcgcgttatatgaaccgcattcttgagatcaatcctgagcaaggctgggtg
cgcgtcgaggctggcgttattaaagaccagctcaaccagtatcttaagtcttatggctat
ttcttcgcgcctgagctgtcgaccagtaaccgtgcgacgctgggcggcatgatcaatacc
gatgcgtcagggcaaggctcgctggtgtacggtaaaacctcagaccatgtgctggggcta
cgtgcagtactgctgggcggcgagatgctggatacgcaggcaatgccagtagaactggca
gagcaactggcggaagaagattcatctatcggccgtatttaccacacggtgctgcaccgc
tgtcgtgaacaacgcgcgttgattatcgacaagttccccaagttgaaccgctttctgacc
ggttatgacctgcgccatgtgttcagcgacgatctccgcacctttgacctgacgcgtatt
ctgactggggctgaaggcacgctggcttttatcactgaagcgaagctcgatatcacgccg
ttgccgaagagccgtcgtctggtgaatatcaagtacgactcctttaattccgcgttgcgc
aatgcgccgtttatggtggaagcgaaagcgttatccgtcgaaacggtggattccaaagtc
ttaaaccttgcccgtgaagatatcgtgtggcattccgtcagtgaactgattaccgatgta
cctaatcaggaaatgcttggcctaaatatcgttgagttcgccggtgacgatgaagcactc
atcaacgggcaggttgagtcgctatgtcaacggctggacacgctgctggctactggggaa
gacgggataattggctatcaaacctgtaacgaccttaccggaatcgaacgtatttacgcc
atgcgtaagaaagccgtcgggctgctgggcaacagtaaggggctggccaagcccatcccg
tttgcggaagatacctgcgtgccgccacaacatctggcggattacatcgaagagttccgc
gcgctgctggacagccacaatctgacgtatggcatgtttggtcatgtggatgcaggagta
ctgcacgttcgccccgcgctggacatgtgtgacccgcaacaggaaatgctgatgaaacag
ctttccgatcagattgtcgcgctgaccgccaaatacggtggcctgctgtggggcgaacac
ggtaaaggcttccgcgccgaatacagtcccgaattctttgggccggaactgtatgccgag
ctgcgtcgcatcaaggcggcgtttgaccctgataaccgacttaatcctaggaagatttgt
gcgccgctcgatgtcgacgcaccgatgatgaaagttgatgcagtcaagcgcggcacgttc
gaccgtacgatcccgctgacggtgcgtactgcgttccgtggtgcgatggaatgtaacggc
aacggattgtgcttcaattttgatgcccgtagcccaatgtgtccgtcgatgaaaatcagc
ggaaaccgtattcattccccgaaaggccgcgcgacgctggtgcgtgaatggttacgtctg
ctggcggagcagggcgtcgatccggttgtattggagaacgccttaccgcagcagaaattg
agcctgcgcgcctttatccagaaaacccgcaatacctggcaggcgaagcaaggcgattac
gacttctcgcatgaagttaaagaggcgatgtcaggctgtctggcgtgtaaagcttgctca
acgcagtgcccgatcaagatcgacgtgcccggtttccgttcccgcttcctacagctttat
cacacgcgctacctgcgcccggttcgtgactatctggtggccggcgtcgaaagctatgcg
ccgctgatggcgcggagtccgaagacgtttaacttcttcctgaaaatgccgttgctgaat
aacctgagccgcagccagatcggcatggttgatttgcccttgctgtcatcgccgtcgctt
cgtcagcagtttgccgggcatagcggagtcaacaccacgcttgaacagttggaacagcta
tcggaacaggcgcgccagcagtacgtgttaatcgtgcaggatccattcaccagctattat
gatgcgcaggtggtggcggatttcgttcatctgatcgaaaaactgaagctgaaaccggtg
ctattgccgttctcgccgaacgggaaggcgcagcacattaaaggcttcttacagcgcttt
gctaaaacggcgtcgaagacggcaggtttcctgaatcgcgttgccaagttggggatgccg
atggtgggtgtcgatccggcactggtgctttgctaccgcgatgaataccgtgaaattctg
ggtgagaagcgtggtgatttccaggtgcaattggtgcatgaatggctggtgacagcgttg
gcagacagcacgcctcagtcttccactggcgagtcctggtatttgctcggccactgtacc
gaaacgaccgcgctgccgatcagcactaagcagtgggccgatatcttctcgcactttggc
gcaaaactggagaatgtcagcgtcgggtgttgcggtatggcgggaacctacggtcatgaa
gccaaaaaccttgccaactcgcagggaatctatgcgctatcctggcaacaggtgttgcag
aagttgccgcagaaacgctgtctgactaccggctattcgtgccgtagtcaggtaaaacgc
atggaaggcagtgcattacgccatccgctacaggccctactggagattctctga
DBGET
integrated database retrieval system
