Pectobacterium atrosepticum SCRI1043: ECA1942
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Entry
ECA1942 CDS
T00186
Name
(GenBank) putative periplasmic oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca01501
beta-Lactam resistance
eca02010
ABC transporters
eca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECA1942
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA1942
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ECA1942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eca02000
]
ECA1942
Transporters [BR:
eca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ECA1942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CAG74845
UniProt:
Q6D5U6
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All DBs
Position
2201168..2202799
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AA seq
543 aa
AA seq
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MNAVIKKRFKHSLLLTLCAAGSMTSVFAAQVPAGTSLAEKQELVRGNGSEPASLDPHKVE
SDVEGHIINDFFDNLVRVGDDGTIQPRLAERWDNKDNTVWTFHLRPDAKWSDGSPITADD
VVYSWRRLGDPKTLSPYGSYIASMYVKNSADIIAGKKAPDTLGIKALDSHTVEVTLEHPL
SYFLEMSAYHVLVPLPKAVIEKHPESWTQVGNFVSSGPYTLSEWVVNERIVGKRNSQYWD
DAHTVINKVTYLPISSQAAELNRYKSGEIDITGLLSPIQFASLQKEYPQEVKVSPLLSTY
FYRFNTGKAPFDDSRIRRALDLSLDKAVIAEKVMGMGQTPAYSLIPKNVGGFQRKDPEWA
SWTQQQRNDEAKKLLKEAGFDEKHPLKLNLLYNTSESHLRVAIAASSMWKKNLGLEVTLQ
NQEWKTMLDTVRTGNFEVVRQSWTGDYNEASTFLNTLETNDSNNNGKFSNTQYDALLKKA
LTVKDKSEKEAIYQQASDILDNDTPLLPIYYYVQPQMVKTYIGGFSPNVRGDYYTQDMYI
LKH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtaatcaaaaaacgttttaaacactcgctgctgcttacactatgtgcggcg
ggatcaatgacatcggtttttgcggcacaggttcctgctggcacgtcgctggcggagaaa
caagagctggtgcgaggcaatggttcagagcctgcatcgttagatccgcataaggtagaa
agcgatgtagaaggccatattatcaacgacttcttcgataatctggtgcgcgtgggcgat
gacggcactatccagccgcgactggccgagcgctgggataataaagacaacacggtgtgg
acattccatctgcgacctgatgctaaatggtccgatggttcaccgattactgcggatgat
gtcgtttacagttggcgacgccttggcgatccaaaaacgttgtcgccttacggcagctac
atcgccagtatgtacgtgaagaattcggcagatattattgctggcaaaaaggcgccagat
acgttgggcataaaagcgctggatagccatacggttgaagttacgctggaacacccgctt
tcctatttcctggaaatgtcggcttatcatgttctggtgccattaccgaaagcagtcatt
gaaaagcatccagaaagttggacacaggttgggaatttcgtcagcagtggcccttatacg
ctgagcgaatgggtggttaacgaacgcatcgtcggtaagcgcaatagccagtattgggat
gatgcgcataccgtgattaacaaagtcacgtatctgccgatcagctcgcaggcggcggaa
ttgaatcgttataaatcgggcgagattgatatcacagggcttttatcaccgattcagttt
gcgtcgctgcaaaaagagtaccctcaggaagtgaaggtttcgccgttgttgtctacctac
ttttatcgtttcaatacgggaaaagccccttttgacgattcacgcattcgccgcgcctta
gacctcagcttagataaagcggtcatcgctgaaaaggtgatgggcatgggccagacgccc
gcttacagtttgattcccaaaaatgtagggggatttcaacgtaaagatcctgagtgggca
agctggacacagcagcagcgtaatgatgaggcgaagaaactgttgaaagaggccggattt
gatgagaaacacccgctgaaactcaatctgctttataacacttccgagtcgcatctacgc
gtggcgattgccgccagttcaatgtggaagaaaaatcttggtctggaagtgacgctgcaa
aatcaggaatggaagaccatgctggataccgtacgtacgggtaattttgaagtggtcaga
caatcttggacaggggattacaatgaagcaagtacgttcttgaatactctggaaaccaac
gacagcaacaacaacggtaaatttagtaatacgcagtatgatgcgttgctgaaaaaggcg
ctgacggtcaaagataagagtgagaaagaggcaatttatcaacaggcctcggatatttta
gataacgacactccattattacccatctactattatgttcagccgcagatggttaagacg
tatatcggtggtttttcgcccaatgttcgcggcgattattacacgcaagatatgtacatc
ctcaagcactaa
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