Pectobacterium atrosepticum SCRI1043: ECA2135
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Entry
ECA2135 CDS
T00186
Name
(GenBank) periplasmic pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00040
Pentose and glucuronate interconversions
eca01100
Metabolic pathways
eca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ECA2135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA2135
Enzymes [BR:
eca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ECA2135
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
CAG75037
UniProt:
Q6D5A5
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Position
complement(2434874..2436580)
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASATTPDRLTIVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNASYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKMGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQIQLGKDLGAEGKELLTWTTDGLKAFAKYAYNAPD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVLKPYAADNSFLLSYARAYTVSPDAELWRVA
RGIAGAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNM
ISTRYKNGFFMAETNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRLE
DGSTRVSTRDNELFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcgggtctggtcgctttacaggccagcgcgact
acaccggaccgtctcaccatcgtcaatcagtatgttgacaacgtgctggcgaaagccggt
gaccattatcacggtcaatcacctacaccactgcttgctgatggcgtcgatccgcgtact
ggcaaacagatggagtggatcttccctgatggtcgtcaggccgtattatccaacttctcc
gctcagcagaacctgatgcgcgtgctggttgggctaagcaacctgagcggcaatgccagc
tataagcagcgtgccgaagcgattgtgaagtaccactttcagcattatcaagatgaaagc
ggcctactgatttggggcggtcaccgtttcgttgatttaaaaacgctgcaaccggaaggc
ccgagcgaaaaagagatggtgcatgagctgaaaaatgcctatccctactacgatttgatg
ttcagcgttgataaagacgcaaccgcacgctttattcgcggtttctggaatgcgcacgtt
tatgactggaagattatggaaaccagtcgccacggtaaatacgggcaaaaaatgggcgca
ctctggcaaagcccgttcgaacaacagccgcccttcttcgccaccaaaggcctcagcttc
ctcaatgcgggtaacgacctgatctattccgcatcgctgctctataaatacaataaggaa
gatggcgcgctggtctgggcaaaacgtttagcgcagcagtatgtactgccacgggataag
gctaccggtcttggcgtgtaccaatttacgcaagcgctgaaacgcgatgaaactaccgac
gatgcggatacacattccaaatacggcgatcgcgcccagcgtcaatttggcccagagttc
ggcccgaccgcgttggaaggcaatatgatgctgaaaggacgcaccagcacgatctattct
gaaaacgcgctcatgcagatccaactgggcaaagatttaggtgcggaaggtaaagagttg
ctgacgtggacaaccgacggcctgaaagcctttgccaaatatgcctacaacgcgcctgac
aacacgttccgtccgatgctggctaacggcaaagatctttccaactacgttctgccacgt
gacggctattacggtaaaaaaggcactgtgcttaagccttatgctgcggataattcgttc
ctgctttcgtatgctcgcgcctataccgtttcaccggacgccgaactgtggcgtgttgca
cgtggtatcgctggcgcacaggggctgggtgaattaggttcagcgccgggtaaagacgtc
aaagtcgatctcgccaccaagaacaacgatccttatgccctgttcgcgctgctggatctg
tatcaggctagcaaagtgaaagactatttgtcgctggcggaaaaagtgggcgataacatg
atcagcacacgttataaaaatggcttcttcatggccgagaccaacagacagtatgccgat
gtcgataccatcgagccttatgccctgttagcgttggaagcggcggtacgcaatcagcca
cagtctgttgctccgttcctgaatggcgcgggtttcactgaaggcggctaccgcctggaa
gatggttcaacgcgcgtgtcgactcgcgataatgaactttttctgctgaacgttggtgaa
acactcaaacccaacaacaagaaataa
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