Pectobacterium atrosepticum SCRI1043: ECA2273
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Entry
ECA2273 CDS
T00186
Symbol
araF
Name
(GenBank) L-arabinose-binding periplasmic protein
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECA2273 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eca02000
]
ECA2273 (araF)
Transporters [BR:
eca02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
ECA2273 (araF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
PucR
DUF1651
Motif
Other DBs
NCBI-ProteinID:
CAG75176
UniProt:
Q6D4W7
LinkDB
All DBs
Position
complement(2575376..2576359)
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AA seq
327 aa
AA seq
DB search
MHKFTKALAAIGLAAVMSQSAMAENIKLGFLVKQPEEPWFQTEWKFADKAGKDLGFDVIK
IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGPAIIAKARSYNLKVIAVDDQFVNAKG
QPMDTVPLVMMAATKIGERQGQELYKEMNKRGWKVDETGVMAITADELDTARRRTAGSMD
ALKAAGFPEKQIYRVPTKSNDIPGAFDAANSMLVQHPGVKNWLIIGMNDNTVLGGVRATE
GQGFKAANVIGIGINGVDAVSELSKGQATGFFGSLLPSPDIHGYKSIQMLNDWVTKGVEP
EKFTEVTDVVLITRDNFKVELEKKGLM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcataaattcactaaggcgctggcagcaatcgggttagccgctgttatgtcacaatca
gctatggcagagaacataaaactgggatttctggttaagcagccggaagagccctggttc
cagaccgaatggaaattcgctgataaggcaggaaaagatctcggttttgatgtgataaaa
attgcggttcctgacggggaaaaaaccctgaacgcaattgatagcctagcggccagcggg
gcgaaaggttttgttatttgtaccccagacccgaaattggggccggccattattgcaaaa
gcacgtagctataacctgaaagtgatcgcggttgatgaccagttcgtgaacgccaaaggt
cagccaatggacacggtgccgttggtgatgatggcggccaccaaaattggtgagcgtcag
ggtcaggaactgtataaagagatgaacaaacgcggctggaaagtagacgaaaccggcgtg
atggcgattaccgctgatgagctggacaccgcgcgccgtcgtactgctggttccatggat
gcgctgaaggctgctggattcccagaaaaacagatctatcgggttccgaccaaatccaac
gatatccccggtgcgtttgacgccgctaactccatgctggttcagcatcctggcgtgaaa
aactggctgattatcggtatgaacgacaacaccgtactgggtggcgttcgtgcgacagaa
ggacagggctttaaagcggcaaacgtcattggtatcggtatcaacggcgtggatgcggtg
agcgaactgtctaagggtcaggcaacgggcttctttggctcactgctgccaagcccagat
attcacggctacaagagtatccagatgctgaatgactgggtcaccaaaggcgtggaaccg
gagaaattcaccgaagtgaccgacgtggtgctgatcactcgtgacaactttaaggtcgaa
ctggagaaaaaaggcctgatgtaa
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integrated database retrieval system
