Pectobacterium atrosepticum SCRI1043: ECA2372
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Entry
ECA2372 CDS
T00186
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00061
Fatty acid biosynthesis
eca00071
Fatty acid degradation
eca01100
Metabolic pathways
eca01212
Fatty acid metabolism
eca02024
Quorum sensing
eca04146
Peroxisome
Module
eca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ECA2372 (fadD)
00071 Fatty acid degradation
ECA2372 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ECA2372 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECA2372 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
eca01004
]
ECA2372 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eca04147
]
ECA2372 (fadD)
Enzymes [BR:
eca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ECA2372 (fadD)
Lipid biosynthesis proteins [BR:
eca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ECA2372 (fadD)
Exosome [BR:
eca04147
]
Exosomal proteins
Exosomal proteins of breast milk
ECA2372 (fadD)
Exosomal proteins of breast cancer cells
ECA2372 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAG75275
UniProt:
Q6D4L8
LinkDB
All DBs
Position
complement(2681736..2683421)
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AA seq
561 aa
AA seq
DB search
MEKIWLSRYPADVPAEIDPDRYSSLIDMFENNVKRYADRPAFINMGEVMTFRKLEERSRA
FAAYLQNQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYTPRELEHQLKDS
GASTIVIVSNFAHTLEKVVHNTAVEHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRRVLQEGRRQQYVRPDIINSDLAFLQYTGGTTGVAKGAMLTHRNMQANVAQCLA
AYGPVLKEGNEWVVTALPLYHIFALTANCLLFFELGGQNLLITNPRDIPAVVKELKQYPF
TAITGVNTLFNALLNNKEFHELDFSTLRLSVGGGASVQRAVAERWEKLTGKHLLEGYGLT
ESSPLVAVNPYDLKHYSGSIGLPVASTDVRIIDDNGNDVGPGESGELWVRGPQVMLGYWQ
QPAATDDVLKDGWLATGDIVTADDEGFLRVIDRKKDMILVSGFNVYPTEIEDVISRHPKV
SESAVIGVENEVSGEAVKAFVVRRDSSLTKEELITHCRRNLTGYKVPKEIEFCEDLPKSN
VGKILRRELRDDKKAKKDAAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaatttggttatctcgctatccggcggacgtaccggcggaaattgacccggat
cgctattcgtcgttgattgacatgtttgaaaataacgtaaagcgttacgccgatcgacct
gcattcatcaacatgggtgaggtgatgacgtttcgcaagttggaagagcggagccgggcg
tttgcggcctatttgcaaaatcagcttaaattgcagaaaggcgatcgcgtggcattgatg
atgcccaacctgctgcaataccccgttgcgctgtttggcgtgctgcgtgcgggtatggtg
gtcgtcaacgttaacccgctgtatacgccacgggaactggaacaccagctaaaagatagc
ggagccagcaccattgttattgtgtctaactttgcacatacgctggaaaaagtcgttcat
aacacggcggtggagcacgttatcttgacccgcatgggcgaccagctatccacggcaaaa
ggtactctggttaacttcgtcgtgaaatacattaagcgactggtgcccaaatatcattta
ccggatgcaatatcgtttcgtcgcgtgttacaggaagggcgacgccagcagtacgttcgg
cctgatatcatcaatagcgatctcgcctttctgcaatataccggcggtacgacgggcgtg
gcgaaaggcgccatgctcacgcaccgcaatatgcaggcgaatgtggcacagtgtcttgcg
gcttatggcccggtgttgaaggaagggaatgaatgggtggtaacggcgttgccgctgtac
catatttttgctttgacggctaactgtctgctgttctttgaactgggcgggcagaatctg
ttgatcaccaatcctcgagatatccctgcggtggtaaaagaactgaaacagtatcctttt
actgcgattacgggcgtcaatacgctgtttaatgcgttgttaaataataaagaattccat
gagcttgatttctcgacactgcgattatccgttggcggaggcgcgtcggtgcaacgggca
gtcgcggaacgttgggagaagctaacgggtaaacatctgcttgagggatatggattaaca
gaaagctcccccttggtggccgtgaatccctacgatctcaaacattacagcggcagtatc
gggctgccagtggcctcaacggatgtcagaatcattgacgataacggcaacgacgttggg
ccgggcgaatccggtgaactgtgggtgcgcgggccgcaggtgatgttagggtattggcag
cagcctgccgctacggatgacgtattaaaagacggctggttggcgacaggtgacattgtc
acggctgatgatgaagggttcctgcgggtgatcgaccgcaagaaagacatgattctggtt
tccggttttaacgtctacccgacggagattgaagacgtgatcagccgtcatcccaaggtg
tccgagtcggcggtgattggggtcgaaaatgaggtatccggtgaggcggtcaaagccttt
gtggtcaggcgtgatagctcattaacaaaagaggaactcattacgcactgtcggcgtaat
cttacgggctataaagtgccgaaagagatcgaattctgtgaggatctgccaaaatccaac
gtcggaaaaattctgcgtcgtgaattacgtgacgataagaaggcaaagaaagacgctgct
gcctga
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