Pectobacterium atrosepticum SCRI1043: ECA2440
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Entry
ECA2440 CDS
T00186
Name
(GenBank) putative RNA pseudouridylate synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eca03009
]
ECA2440
Enzymes [BR:
eca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ECA2440
Ribosome biogenesis [BR:
eca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECA2440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAG75342
UniProt:
Q6D4F1
LinkDB
All DBs
Position
2755854..2756510
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AA seq
218 aa
AA seq
DB search
MLLLPATIKMMNKFPVKNHKVKRFSSQPARKRQPDNTPRRIVLFNKPFDVLPQFTDEAGR
STLKDYIPISGIYAAGRLDRDSEGLMILTNDGKLQAQLTQPTKKTAKIYYVQVEGIPDDA
ILTRFRTGLELNDGKTQPAGAEIVPEPDWLWPRNPPIRERKSIPDCWLKITLYEGRNRQV
RRMTANIGYPTLRLIRYSMANQTVENLLPGEWKEIADV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgttacccgcgactataaagatgatgaataaattccctgttaaaaatcacaaa
gttaaacgattcagctcacagccagccagaaaaaggcagcctgacaatacgccgcgccgg
attgttctgttcaataagccctttgatgtcttgccacaattcactgatgaagccggacgt
agcacgctgaaagattacattccgattagcggtatttatgccgccgggcgtctggatcgc
gacagcgaaggcctgatgattctcaccaatgacggcaaacttcaagcacagctaactcag
ccaacgaaaaaaacggccaaaatttactatgtgcaagttgaaggcattcctgatgacgcc
atattgacgcgctttcgtactggtctggagctgaatgacggcaaaacgcagcccgcgggc
gcggagatcgtgccggaacctgactggctgtggccgcgtaatcctccaatacgcgaacgt
aaaagcattcctgactgctggctaaaaattacgctgtatgaaggtcgtaatcggcaagtc
cgtcgtatgacggcgaatatcgggtatcctaccctgcgtctgattcgatacagcatggcc
aatcaaaccgtagaaaacctgttacccggagaatggaaggagatagcggatgtttaa
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