Pectobacterium atrosepticum SCRI1043: ECA3278
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Entry
ECA3278 CDS
T00186
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ECA3278 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA3278 (rnc)
03009 Ribosome biogenesis [BR:
eca03009
]
ECA3278 (rnc)
03036 Chromosome and associated proteins [BR:
eca03036
]
ECA3278 (rnc)
Enzymes [BR:
eca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ECA3278 (rnc)
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECA3278 (rnc)
Ribosome biogenesis [BR:
eca03009
]
Eukaryotic type
90S particles
RNase
ECA3278 (rnc)
Prokaryotic type
rRNA processing factors
ECA3278 (rnc)
Chromosome and associated proteins [BR:
eca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ECA3278 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CAG76176
UniProt:
Q6D219
LinkDB
All DBs
Position
complement(3682688..3683368)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINRLQRKLGYTFQQYELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYDRF
PKVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDILNIERLILNWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSESVIGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcctgataaatcgtttacaaagaaagctgggctatacttttcagcagtac
gagcttttgttacaggcgttgacgcatcgtagcgccagcagcaaacataatgaaaggctc
gaattcctgggtgactccatcctgagttttgtgatcgccaatgcgctgtatgaccgtttc
cccaaagttgatgaaggggatatgagccggatgcgggcgacgctggtgcggggaaatacc
ctggcggaaatcgcgcgtgaattcgaactgggagagtgcttgcgcctcggtcccggcgaa
ttaaaaagcggtggtttccgtcgtgaatcgatcttggctgatacggtcgaagcgctgatt
ggtggtattttcctcgacagtgacatcctgaatatcgaacgtttgatcctgaattggtat
caaacgcgtctggatgaaatcagtcctggcgataagcaaaaagatccaaaaacgcggttg
caggaatttctgcaagggcgccatttacctttgccaacctatctggtggtgcaggttcgt
ggggaagcacacgatcaggaatttactatccactgtcaggtgagcggctttagtgagtcg
gtcattggcactggatcgagtcgtcgtaaagccgaacaggctgcggctgaacaagcgttg
aaaaaactggagcttgaatga
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