Pectobacterium atrosepticum SCRI1043: ECA3319
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Entry
ECA3319 CDS
T00186
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECA3319 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eca03019
]
ECA3319 (pcnB)
Enzymes [BR:
eca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECA3319 (pcnB)
Messenger RNA biogenesis [BR:
eca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECA3319 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
HD
Motif
Other DBs
NCBI-ProteinID:
CAG76217
UniProt:
Q6D1X8
LinkDB
All DBs
Position
3730782..3732230
Genome browser
AA seq
482 aa
AA seq
DB search
MPLIYPSLSRCIIFSRVANFCRKVLNRENEMVQSEEPRQHLTVIPRDQHTISRSDISDNA
LKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDITTNATPDQVRKLFRNCRLVGRRFRL
AHIMFGPEVIEVATFRGHHEQHQEQQEAKNSSQQAQSGMLLRDNIFGSVEEDAQRRDFSI
NSLYYSISDFSVRDYTNGLNDLRQGVIRMIGDPETRYREDPVRMLRAVRFAAKLNMTVSP
ETAEPIPRLAALLHDIPAARMFEESLKLLQSGYGYPTYKMLCEYQLFQPLFPLLSRHFTP
NSDSTLERMVAQVLKNTDQRLQNDMRVNPAFLFSAMLWYPLIEHAQKLAQESGLAYLDAF
ALAMNDVLDEQCRSLAIPKRITSLVRDIWQLQMRLSRRQGKRAYKLMEHPKFRAAYDLLC
LRAEIENHQELLRLAQWWGEFQVAAPPRQQNMLKSLDDGPTPHRRSRPRRPRKPTTARRD
QP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttgatttatccatcactatcgaggtgtattatcttttcccgagttgctaatttt
tgtcgtaaagtactgaatcgtgagaacgaaatggtccaatcagaggaaccgcgtcagcat
ctgacggtaatcccgcgtgaccaacatactatttcacgcagtgacatcagcgataatgcg
ctgaaagtactttatcgcctgaacaaagcgggctacgaagcttatctggttggcggcggc
gtacgcgatctgctgctgggtaaaaagccgaaggattttgatatcaccactaacgccacg
cccgatcaggtgcgcaagttattccgcaactgtcgtttggtagggcgtcgtttccgtctc
gcacatattatgttcgggcccgaggtgattgaagttgctacattccgcggtcaccatgaa
cagcatcaggaacagcaagaagccaaaaactcttctcagcaggctcagagcggcatgctg
ctgcgcgacaacattttcggatcggttgaagaagacgcccaacgccgcgatttttctatc
aatagcctctattacagtatttctgatttcagcgtacgcgattataccaatggcctgaac
gatctccgccagggtgtcattcgcatgattggcgatcctgaaacgcgctaccgtgaagat
ccggtgcgtatgctgcgtgccgtccgtttcgctgccaagttgaacatgaccgtcagcccg
gaaaccgccgaaccgattcctcgtctggccgcgctgctgcatgatattcctgcggcgcgg
atgtttgaggaatcgctgaagctgcttcagtcaggctatggctacccaacgtataaaatg
ctgtgtgaataccagctgttccagccgcttttcccactgctgagccgccatttcacacca
aacagcgattccacgctggaacgcatggttgcacaagtgctgaaaaacaccgatcagcgt
ctgcaaaacgatatgcgggtgaatccggcatttttgttctccgccatgctgtggtatccg
ctgattgaacatgcgcaaaagctggcacaggaaagtggtctggcctacttagatgcgttc
gcgctggcaatgaacgatgtgctggacgaacaatgccgttctctggcgatccctaagcgt
attacctctttagtccgcgatatctggcaactgcaaatgcgcctgtctcgtcgtcagggt
aaacgcgcttataaactgatggagcatcctaaattccgcgccgcgtatgaccttctttgc
ctgcgcgccgagattgaaaaccatcaggagctgctgcgtctggctcagtggtggggagaa
ttccaagttgcggccccgccgcgtcagcaaaatatgcttaaatcgctggatgatggcccg
acaccacatcgtcgctcccgccctcgtcgaccgcgtaaacctacgacagcacgcagggat
caaccctga
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