Pectobacterium atrosepticum SCRI1043: ECA3449
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Entry
ECA3449 CDS
T00186
Symbol
nfxB
Name
(GenBank) transcriptional regulator of multidrug resistance genes
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
eca
Pectobacterium atrosepticum SCRI1043
Module
eca_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eca03000
]
ECA3449 (nfxB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
eca01504
]
ECA3449 (nfxB)
Transcription factors [BR:
eca03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECA3449 (nfxB)
Antimicrobial resistance genes [BR:
eca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
ECA3449 (nfxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_7
HTH_IclR
HTH_24
HTH_23
HTH_10
HTH_3
HTH_AsnC-type
MarR
Glycos_trans_3N
Xre-like-HTH
HTH_Tnp_1_2
MarR_2
HTH_32
Motif
Other DBs
NCBI-ProteinID:
CAG76348
UniProt:
Q6D1J7
LinkDB
All DBs
Position
3871027..3871593
Genome browser
AA seq
188 aa
AA seq
DB search
MSENISDKLAGALALAIARNPRANLQQIAKKAGISKATLYRIAPTREAIIVLLLERATRH
LEQALFSAELARAPYPDALIRLTENVIVGRDFYMFWNAAQWVQMVDDRKDAVDEAMPSFY
GEALEEFFKKGQKEGAFRIDMPARWLAKAYDSMLYAAVDSALRGEIAPVDMAALVNSMFL
NGASSEKG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatatcagtgacaagctggccggcgctctggcccttgcaatcgcccgcaat
cccagagcaaatctgcaacaaatagccaagaaagcggggattagcaaagccactctgtac
cgaatcgcaccgaccagagaggcgatcatcgtactcttgcttgaacgcgccacccgtcac
cttgaacaggctctttttagcgcggaactagcaagagcaccttaccctgatgcattgatt
cggctcacggagaacgtcattgtaggacgtgatttttacatgttttggaatgcggctcag
tgggtgcagatggtggatgacagaaaagatgccgtggatgaagccatgccttccttttat
ggtgaagcactggaagaatttttcaagaagggtcaaaaggaaggggcgttccgcattgat
atgccagctcgatggctcgccaaagcttacgattctatgctttatgctgcagttgattct
gcattacggggcgaaattgcacccgtcgatatggcagcgctggttaattccatgtttctt
aatggggcgagttcggagaagggctga
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